Tim Regan

发表

Graphia: A platform for the graph-based visualisation and analysis of high dimensional data

Barbara B. Shih, D. Hume, T. Freeman, 2022, PLoS Comput. Biol..

Replicable and Coupled Changes in Innate and Adaptive Immune Gene Expression in Two Case-Control Studies of Blood Microarrays in Major Depressive Disorder

S. Richardson, V. Perry, E. Bullmore, 2018, Biological Psychiatry.

Graphia: A platform for the graph-based visualisation and analysis of complex data

Tim Angus, David A. Hume, Tom C. Freeman, 2020, bioRxiv.

Characterisation of the British honey bee metagenome

M. Blaxter, T. Freeman, G. Budge, 2018 .

Characterisation of the UK honey bee (Apis mellifera) metagenome

M. Blaxter, T. Freeman, G. Budge, 2018, bioRxiv.

Characterisation of the UK honey bee metagenome

M. Blaxter, G. Budge, S. Bush, 2018 .

Potential of genomic technologies to improve disease resistance in molluscan aquaculture

C. Peñaloza, A. Gutierrez, T. Bean, 2020, Philosophical Transactions of the Royal Society B.

Identification of TLR10 as a Key Mediator of the Inflammatory Response to Listeria monocytogenes in Intestinal Epithelial Cells and Macrophages

F. Shanahan, R. Carmody, John Macsharry, 2013, The Journal of Immunology.

A Genome-Wide CRISPR/Cas9 Screen Reveals the Requirement of Host Sphingomyelin Synthase 1 for Infection with Pseudorabies Virus Mutant gD–Pass

J. Baillie, B. Klupp, T. Mettenleiter, 2021, Viruses.

Pleiotropic Impacts of Macrophage and Microglial Deficiency on Development in Rats with Targeted Mutation of the Csf1r Locus

Lee B. Smith, D. Hume, T. Burdon, 2018, The Journal of Immunology.

Assembly of a parts list of the human mitotic cell cycle machinery

Stefan Wiemann, Tom C Freeman, Tony Ly, 2018, bioRxiv.

Chromosome‐level reference genome for European flat oyster (Ostrea edulis L.)

A. Tanguy, I. Boutet, C. Peñaloza, 2022, bioRxiv.

Fas Modulating Intestinal TLR-Mediated through TLR 4 and TLR 5 , with Activation of Is Upregulated by Bacterial Signaling Intestinal Expression of Fas and Fas Ligand

P. Fallon, E. Brint, T. Regan, 2014 .

Genome-wide CRISPR screen identifies host dependency factors for influenza A virus infection

Paul J. Hoover, John G Doench, N. Hacohen, 2020, Nature Communications.

Genetic improvement technologies to support the sustainable growth of UK aquaculture

T. Ellis, T. Bean, R. Houston, 2021, Reviews in Aquaculture.

Systematic comparison of ranking aggregation methods for gene lists in experimental results

J. Baillie, J. Cole, T. Regan, 2022, bioRxiv.

Effects of anti‐inflammatory drugs on the expression of tryptophan‐metabolism genes by human macrophages

E. Bullmore, D. Hume, C. Pariante, 2018, Journal of leukocyte biology.

Structural and kinetic determinants of protease substrates

G. Salvesen, S. Riedl, J. Timmer, 2009, Nature Structural &Molecular Biology.

Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumors

Barbara B. Shih, D. Hume, T. Freeman, 2018, Cancer Immunology Research.

Edinburgh Research Explorer Immune cell gene signatures for profiling the microenvironment of solid tumours

Barbara B. Shih, Ajit Johnson Nirmal, T. Freeman, 2018 .

Efficient CRISPR/Cas9 genome editing in a salmonid fish cell line using a lentivirus delivery system

Samuel A. M. Martin, P. Boudinot, R. Houston, 2019, bioRxiv.

Effects of immunomodulatory drugs on depressive symptoms: A mega-analysis of randomized, placebo-controlled clinical trials in inflammatory disorders

R. B. Henderson, S. Richardson, E. Bullmore, 2019, Molecular Psychiatry.

Stem cell-derived porcine macrophages as a new platform for studying host-pathogen interactions

Barbara B. Shih, Musa A. Hassan, B. McColl, 2022, BMC Biology.

Stem cell-derived macrophages as a new platform for studying host-pathogen interactions in livestock

Barbara B. Shih, Musa A. Hassan, A. Lawrence, 2021 .

Tracing innate immune defences along the path of Listeria monocytogenes infection

John Macsharry, E. Brint, T. Regan, 2014, Immunology and cell biology.

Identification of TLR10 as a Key Mediator of the Inflammatory Response to Listeria monocytogenes in Intestinal Epithelial Cells and Macrophages

F. Shanahan, R. Carmody, John Macsharry, 2013, The Journal of Immunology.

Intestinal Expression of Fas and Fas Ligand Is Upregulated by Bacterial Signaling through TLR4 and TLR5, with Activation of Fas Modulating Intestinal TLR-Mediated Inflammation

P. Fallon, E. Brint, T. Regan, 2014, The Journal of Immunology.

Systematic comparison of ranking aggregation methods for gene lists in experimental results

J. Baillie, C. Russell, D. Dockrell, 2022, bioRxiv.

Characterisation of the British honey bee metagenome

D. Laetsch, M. Barnett, J. D. de Miranda, 2018, Nature Communications.

Characterisation of the British honey bee metagenome

M. Blaxter, T. Freeman, G. Budge, 2018 .

ImSig: A resource for the identification and quantification of immune signatures in blood and tissue transcriptomics data

Barbara B. Shih, Ajit Johnson Nirmal, T. Freeman, 2016, bioRxiv.

Edinburgh Research Explorer Assembly of a Parts List of the Human Mitotic Cell Cycle Machinery

Bruno Giotti, M. Barnett, Tim Regan, 2022 .

Genome Report: A blue mussel chromosome-scale genome assembly for aquaculture, marine ecology and evolution

T. Bean, T. Hori, Tim Regan, 2024, bioRxiv.