S. V. D. van den Elsen

发表

Characterization of the Habitat- and Season-Independent Increase in Fungal Biomass Induced by the Invasive Giant Goldenrod and Its Impact on the Fungivorous Nematode Community

G. Gort, C. Quist, J. Helder, 2020, bioRxiv.

Phylum-wide analysis of SSU rDNA reveals deep phylogenetic relationships among nematodes and accelerated evolution toward crown Clades.

Johannes Helder, Oleksandr Holovachov, Tom Bongers, 2006, Molecular biology and evolution.

Small subunit ribosomal DNA-based phylogenetic analysis of foliar nematodes (Aphelenchoides spp.) and their quantitative detection in complex DNA backgrounds.

P. Veenhuizen, P. Mooyman, J. Bakker, 2012, Phytopathology.

SSU Ribosomal DNA-Based Monitoring of Nematode Assemblages Reveals Distinct Seasonal Fluctuations within Evolutionary Heterogeneous Feeding Guilds

C. Mulder, P. Veenhuizen, J. Vonk, 2012, PloS one.

Small subunit ribosomal DNA-based phylogeny of basal Chromadoria (Nematoda) suggests that transitions from marine to terrestrial habitats (and vice versa) require relatively simple adaptations.

O. Holovachov, J. Bakker, J. Helder, 2008, Molecular phylogenetics and evolution.

A ribosomal DNA‐based framework for the detection and quantification of stress‐sensitive nematode families in terrestrial habitats

P. Mooyman, J. Bakker, J. Helder, 2008, Molecular ecology resources.

Comparative genomics among three cyst nematode species reveals distinct evolutionary histories among effector families and an irregular distribution of effector-associated promoter motifs

P. Thorpe, G. Smant, J. Helder, 2021 .

A rapid, sensitive, and cost-efficient assay to estimate viability of potato cyst nematodes.

J. Bakker, J. Helder, R. Landeweert, 2012, Phytopathology.

Disparate gain and loss of parasitic abilities among nematode lineages

D. Bird, J. Kammenga, C. Opperman, 2017, PloS one.

Pinpointing the distinctive impacts of ten cover crop species on the resident and active fractions of the soil microbiome

L. Mommer, J. Maciá‐Vicente, J. Helder, 2022, bioRxiv.

Rather than by direct acquisition via lateral gene transfer, GHF5 cellulases were passed on from early Pratylenchidae to root-knot and cyst nematodes

P. Mooyman, G. Smant, J. Bakker, 2012, BMC Evolutionary Biology.

Small subunit rDNA-based phylogeny of the Tylenchida sheds light on relationships among some high-impact plant-parasitic nematodes and the evolution of plant feeding.

J. Bakker, J. Helder, G. Karssen, 2009, Phytopathology.

Comparative genomics among cyst nematodes reveals distinct evolutionary histories among effector families and an irregular distribution of effector‐associated promoter motifs

P. Thorpe, G. Smant, J. Helder, 2022, Molecular ecology.

The differential impact of a native and a non‐native ragwort species (Senecioneae) on the first and second trophic level of the rhizosphere food web

L. B. Snoek, C. Quist, J. Helder, 2017 .

Shifts in the Active Rhizobiome Paralleling Low Meloidogyne chitwoodi Densities in Fields Under Prolonged Organic Soil Management

J. Helder, M. Holterman, S. J. van den Elsen, 2020, Frontiers in Plant Science.

Organic amendment strengthens interkingdom associations in the soil and rhizosphere of barley (Hordeum vulgare).

E. Kuramae, J. Helder, G. Korthals, 2019, The Science of the total environment.

Conventional and organic soil management as divergent drivers of resident and active fractions of major soil food web constituents

E. Kuramae, J. Helder, M. Holterman, 2019, Scientific Reports.

Mapping of long-term impact of conventional and organic soil management on resident and active fractions of rhizosphere communities of barley

E. Kuramae, J. D. Haan, J. Helder, 2019, bioRxiv.

A full-length SSU rRNA-based workflow for high-resolution monitoring of nematode communities reveals direct and indirect responses to plant-based manipulations

S. Elsen, Johannes A. Helder, S. V. D. van den Elsen, 2023, Soil Biology and Biochemistry.

On the Legacy of Cover Crop-Specific Microbial Footprints

L. Mommer, J. Postma, S. J. van den Elsen, 2023, SSRN Electronic Journal.