Joseph H. Lubin

Novel sampling strategies and a coarse-grained score function for docking homomers, flexible heteromers, and oligosaccharides using Rosetta in CAPRI Rounds 37–45

Jason W. Labonte, Jeffrey J. Gray, Jeffrey J. Gray, 2019, bioRxiv.

Evolution of the SARS-CoV-2 proteome in three dimensions (3D) during the first six months of the COVID-19 pandemic

Joseph H. Lubin, Jonathan K. Williams, Bonnie L. Hall, 2020, bioRxiv.

Virtual Boot Camp: COVID‐19 evolution and structural biology

Joseph H. Lubin, Bonnie L. Hall, S. Burley, 2020, Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology.

Genetic and Structural Analysis of SARS-CoV-2 Spike Protein for Universal Epitope Selection

Joseph H. Lubin, Vinícius G. Contessoto, J. Onuchic, 2022, Molecular biology and evolution.

Outcome of Crash Course Training on Protein Structure Prediction with Artificial Intelligence

Joseph H. Lubin, J. B. von Oehsen, S. Burley, 2022, bioRxiv.

Structural models of SARS-CoV-2 Omicron variant in complex with ACE2 receptor or antibodies suggest altered binding interfaces

Joseph H. Lubin, S. Burley, S. Khare, 2021, bioRxiv.

Prediction and Design of Protease Enzyme Specificity Using a Structure-Aware Graph Convolutional Network

Joseph H. Lubin, S. Khare, Sijian Wang, 2023, bioRxiv.

Macromolecular modeling and design in Rosetta: recent methods and frameworks

Brian D. Weitzner, Lars Malmström, Karen R. Khar, 2020, Nature Methods.

Evolution of the SARS‐CoV‐2 proteome in three dimensions (3D) during the first 6 months of the COVID‐19 pandemic

Joseph H. Lubin, Jonathan K. Williams, Bonnie L. Hall, 2021, Proteins.

A comprehensive survey of coronaviral main protease active site diversity in 3D: Identifying and analyzing drug discovery targets in search of broad specificity inhibitors for the next coronavirus pandemic

Joseph H. Lubin, S. Burley, S. Khare, 2023, bioRxiv.

A Parametric Rosetta Energy Function Analysis with LK Peptides on SAM Surfaces.

Jeffrey J. Gray, Jeffrey J Gray, Joseph H. Lubin, 2018, Langmuir : the ACS journal of surfaces and colloids.

Novel sampling strategies and a coarse‐grained score function for docking homomers, flexible heteromers, and oligosaccharides using Rosetta in CAPRI rounds 37–45

Jason W. Labonte, Jeffrey J. Gray, Jeffrey J Gray, 2019, Proteins.

Modeling of ACE2 and antibodies bound to SARS-CoV-2 provides insights into infectivity and immune evasion

Joseph H. Lubin, S. Burley, S. Khare, 2023, JCI insight.

Macromolecular modeling and design in Rosetta: recent methods and frameworks

Brian D. Weitzner, Karen R. Khar, Roland L. Dunbrack, 2020, Nature Methods.