Brian E. Scheffler

Sub genome anchored physical frameworks of the allotetraploid Upland cotton (Gossypium hirsutum L.) genome, and an approach toward reference-grade assemblies of polyploids

Don C. Jones, J. Grimwood, J. Schmutz, 2017, Scientific Reports.

Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement

Don C. Jones, John T. Lovell, S. Shu, 2020, Nature Genetics.

Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres

Justin T. Page, Don C. Jones, Klaus F. X. Mayer, 2012, Nature.

Metagenomic analysis of the turkey gut RNA virus community

Brian E Scheffler, J. M. Day, Linda L Ballard, 2010, Virology Journal.

UPIC: Perl scripts to determine the number of SSR markers to run

Brian E Scheffler, Renee S Arias, Linda L Ballard, 2009, Bioinformation.

Two haplotype-resolved genomes reveal important flower traits in bigleaf hydrangea (Hydrangea macrophylla) and insights into Asterid evolution

Amanda M. Hulse-Kemp, R. Youngblood, T. Rinehart, 2023, Horticulture research.

Representing true plant genomes: haplotype-resolved hybrid pepper genome with trio-binning

Amanda M. Hulse-Kemp, R. Youngblood, Emily E. Delorean, 2023, Frontiers in plant science.