Rafael Silva-Rocha

发表

Enhancing Metagenomic Approaches Through Synthetic Biology

Luana de Fátima Alves, Rafael Silva-Rocha, María-Eugenia Guazzaroni, 2017 .

Benchmarking available bacterial promoter prediction tools: potentialities and limitations

Rafael Silva-Rocha, Murilo Henrique Anzolini Cassiano, Rafael Silva-Rocha, 2020, bioRxiv.

Decision letter: An analog to digital converter controls bistable transfer competence development of a widespread bacterial integrative and conjugative element

Rafael Silva-Rocha, Eva M. Top, 2020 .

Benchmarking Bacterial Promoter Prediction Tools: Potentialities and Limitations

Rafael Silva-Rocha, Murilo Henrique Anzolini Cassiano, Rafael Silva-Rocha, 2020, mSystems.

Engineering Complexity in Bacterial Regulatory Circuits for Biotechnological Applications

María-Eugenia Guazzaroni, Cauã Antunes Westmann, Rafael Silva-Rocha, 2018, mSystems.

Recent advances in plasmid-based tools for establishing novel microbial chassis.

María-Eugenia Guazzaroni, Vijai Kumar Gupta, Luísa Czamanski Nora, 2019, Biotechnology advances.

Quantitative, Non-Disruptive Monitoring of Transcription in Single Cells with a Broad-Host Range GFP-luxCDABE Dual Reporter System

Victor de Lorenzo, Rafael Silva-Rocha, V. de Lorenzo, 2012, PloS one.

Linking genes to microbial growth kinetics: an integrated biochemical systems engineering approach.

Athanasios Mantalaris, Victor de Lorenzo, Alexandros Kiparissides, 2011, Metabolic engineering.

Broadening the signal specificity of prokaryotic promoters by modifying cis-regulatory elements associated with a single transcription factor.

Víctor de Lorenzo, Rafael Silva-Rocha, V. de Lorenzo, 2012, Molecular bioSystems.

The private life of environmental bacteria: pollutant biodegradation at the single cell level.

Víctor de Lorenzo, Rafael Silva-Rocha, Ilaria Benedetti, 2014, Environmental microbiology.

The differential response of the Pben promoter of Pseudomonas putida mt-2 to BenR and XylS prevents metabolic conflicts in m-xylene biodegradation.

Víctor de Lorenzo, Rafael Silva-Rocha, Juhyun Kim, 2015, Environmental microbiology.

Improving the prediction of Pseudomonas putida mt-2 growth kinetics with the use of a gene expression regulation model of the TOL plasmid

Efstratios N. Pistikopoulos, Athanasios Mantalaris, Víctor de Lorenzo, 2011 .

The TOL network of Pseudomonas putida mt-2 processes multiple environmental inputs into a narrow response space.

Víctor de Lorenzo, Rafael Silva-Rocha, V. de Lorenzo, 2013, Environmental microbiology.

The logicome of environmental bacteria: merging catabolic and regulatory events with Boolean formalisms.

Víctor de Lorenzo, Javier Tamames, Rafael Silva-Rocha, 2011, Environmental microbiology.

The regulatory logic of m-xylene biodegradation by Pseudomonas putida mt-2 exposed by dynamic modelling of the principal node Ps/Pr of the TOL plasmid.

Athanasios Mantalaris, Victor de Lorenzo, Alexandros Kiparissides, 2009, Environmental microbiology.

Expanding the logic of bacterial promoters using engineered overlapping operators for global regulators.

María-Eugenia Guazzaroni, Rafael Silva-Rocha, Rafael Silva-Rocha, 2014, ACS synthetic biology.

Engineering multicellular logic in bacteria with metabolic wires.

Victor de Lorenzo, Rafael Silva-Rocha, V. de Lorenzo, 2014, ACS synthetic biology.