Philippe Ortet

发表

Host cell subversion by Toxoplasma GRA16, an exported dense granule protein that targets the host cell nucleus and alters gene expression.

A. Bougdour, P. Ortet, M. Barakat, 2013, Cell host & microbe.

Proteomics-based Refinement of Deinococcus deserti Genome Annotation Reveals an Unwonted Use of Non-canonical Translation Initiation Codons

M. Baudet, C. Enjalbal, J. Armengaud, 2009, Molecular & Cellular Proteomics.

ProTISA: a comprehensive resource for translation initiation site annotation in prokaryotic genomes

Philippe Ortet, Huaiqiu Zhu, Gang-Qing Hu, 2007, Nucleic Acids Res..

A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise Z-score probabilities

Philippe Ortet, Olivier Bastien, Eric Maréchal, 2005, BMC Bioinformatics.

P2CS: updates of the prokaryotic two-component systems database

Philippe Ortet, David E. Whitworth, Catherine Santaella, 2014, Nucleic Acids Res..

P2TF: a comprehensive resource for analysis of prokaryotic transcription factors

P. Ortet, D. Whitworth, G. De Luca, 2012, BMC Genomics.

The Cyst-Dividing Bacterium Ramlibacter tataouinensis TTB310 Genome Reveals a Well-Stocked Toolbox for Adaptation to a Desert Environment

J. Weissenbach, G. Fichant, Y. Quentin, 2011, PloS one.

A Complex Small RNA Repertoire Is Generated by a Plant/Fungal-Like Machinery and Effected by a Metazoan-Like Argonaute in the Single-Cell Human Parasite Toxoplasma gondii

O. Voinnet, D. Cannella, Mohamed-Ali Hakimi, 2010, PLoS pathogens.

A complex small RNA repertoire is genereted by a plant/fungal-lide machinery and effected by a metazoan-like argonaute in the single-cell human parasite Toxoplasma gondii

O. Voinnet, M. Barakat, O. Bastien, 2020 .

Structure, Function, and Evolution of the Thiomonas spp. Genome

Philippe Ortet, Céline Brochier-Armanet, Patricia Siguier, 2010, PLoS genetics.

A Tale of Two Oxidation States: Bacterial Colonization of Arsenic-Rich Environments

J. Weissenbach, A. Danchin, C. Médigue, 2007, PLoS genetics.

An insight into the genome of extensively drug-resistant and uropathogenic Citrobacter werkmanii.

Asad U. Khan, P. Ortet, M. Barakat, 2020, Journal of global antimicrobial resistance.

Integration and mining of malaria molecular, functional and pharmacological data: how far are we from a chemogenomic knowledge space?

Martin Hofmann-Apitius, Philippe Ortet, Olivier Bastien, 2006, Malaria Journal.

A genome-wide transcriptional analysis using Arabidopsis thaliana Affymetrix gene chips determined plant responses to phosphate deprivation.

S. Somerville, Ajay Jain, K. Raghothama, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Pearl millet genotype impacts microbial diversity and enzymatic activities in relation to root-adhering soil aggregation

L. Laplaze, P. Ortet, M. Barakat, 2021, Plant and Soil.

The histone methylase KMTox interacts with the redox‐sensor peroxiredoxin‐1 and targets genes involved in Toxoplasma gondii antioxidant defences

J. Garin, P. Ortet, O. Bastien, 2009, Molecular microbiology.

Discovery and characterization of UipA, a uranium- and iron-binding PepSY protein involved in uranium tolerance by soil bacteria

B. Alpha-Bazin, J. Armengaud, P. Arnoux, 2021, The ISME Journal.

Bacterial adaptation to hot and dry deserts

L. Blanchard, P. Ortet, M. Barakat, 2012 .

Culturing the desert microbiota

M. Barakat, W. Achouak, T. Heulin, 2023, Frontiers in Microbiology.

Plant Nutrient Resource Use Strategies Shape Active Rhizosphere Microbiota Through Root Exudation

P. Ortet, M. Barakat, W. Achouak, 2018, Front. Plant Sci..

Microbiote shift in the Medicago sativa rhizosphere in response to cyanotoxins extract exposure.

P. Ortet, M. Barakat, W. Achouak, 2016, The Science of the total environment.

ATM-Mediated Transcriptional and Developmental Responses to γ-rays in Arabidopsis

J. Renou, P. Ortet, S. Fochesato, 2007, PloS one.

Isolation and identification of Pseudomonas syringae facilitated by a PCR targeting the whole P. syringae group.

C. Morris, P. Ortet, M. Barakat, 2016, FEMS microbiology ecology.

Pearl Millet Genetic Traits Shape Rhizobacterial Diversity and Modulate Rhizosphere Aggregation

Y. Vigouroux, P. Ortet, M. Barakat, 2017, Front. Plant Sci..

Alliance of Proteomics and Genomics to Unravel the Specificities of Sahara Bacterium Deinococcus deserti

P. Siguier, V. Barbe, B. Vacherie, 2009, PLoS genetics.

Phytobeneficial bacteria improve saline stress tolerance in Vicia faba and modulate microbial interaction network.

P. Ortet, M. Barakat, W. Achouak, 2020, The Science of the total environment.

Modulation of Metabolism and Switching to Biofilm Prevail over Exopolysaccharide Production in the Response of Rhizobium alamii to Cadmium

P. Ortet, P. Schmitt‐Kopplin, W. Achouak, 2011, PloS one.

Drug inhibition of HDAC3 and epigenetic control of differentiation in Apicomplexa parasites

P. Baldacci, R. Ménard, A. Bougdour, 2009, The Journal of experimental medicine.

Geometagenomics illuminates the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale

Philippe Ortet, Emmanuel Fernandez, Darren P Martin, 2017, The ISME Journal.

Modifications at K31 on the lateral surface of histone H4 contribute to genome structure and expression in apicomplexan parasites

A. Bougdour, P. Ortet, M. Barakat, 2017, eLife.

The shape and speciation of Ag nanoparticles drive their impacts on organisms in a lotic ecosystem

J. Hazemann, P. Ortet, M. Barakat, 2020, Environmental Science: Nano.

Amplifying and Fine-Tuning Rsm sRNAs Expression and Stability to Optimize the Survival of Pseudomonas brassicacerum in Nutrient-Poor Environments

P. Schmitt‐Kopplin, W. Achouak, T. Heulin, 2021, Microorganisms.

Where Does the Alignment Score Distribution Shape Come from?

Philippe Ortet, Olivier Bastien, Philippe Ortet, 2010, Evolutionary bioinformatics online.

P2CS: a two-component system resource for prokaryotic signal transduction research

P. Ortet, M. Ansaldi, C. Jourlin-Castelli, 2009, BMC Genomics.

A MORC-driven transcriptional switch controls Toxoplasma developmental trajectories and sexual commitment

A. Bougdour, P. Ortet, M. Barakat, 2020, Nature Microbiology.

Bacterial diversity and community structure in the rhizosphere of the halophyte Halocnemum strobilaceum in an Algerian arid saline soil

P. Ortet, M. Barakat, W. Achouak, 2022, Extremophiles.