Jean-Claude Farré

发表

TRIM37 deficiency induces autophagy through deregulating the MTORC1-TFEB axis

Wei Wang, S. Subramani, J. Farré, 2018, Autophagy.

Guidelines for the use and interpretation of assays for monitoring autophagy

Robert Clarke, Hong Jiang, Hiroyuki Ishida, 2012 .

Peroxisome size provides insights into the function of autophagy-related proteins.

S. Subramani, J. Farré, T. Y. Nazarko, 2009, Molecular biology of the cell.

Turnover of Organelles by Autophagy in Yeast This Review Comes from a Themed Issue on Membranes and Organelles Edited Atg9 and Its Cycling System the Cvt Pathway Er-phagy

S. Subramani, M. Thumm, J. Farré, 2022 .

Molecular Machines Involved in Pexophagy

J. Farré, T. Y. Nazarko, T. Nazarko, 2014 .

PpAtg30 tags peroxisomes for turnover by selective autophagy.

S. Subramani, Ravi Manjithaya, J. Farré, 2008, Developmental cell.

Convergent and divergent mechanisms of peroxisomal and mitochondrial division

S. Subramani, J. Farré, Nandini Shukla, 2023, The Journal of cell biology.

Molecular mechanism and physiological role of pexophagy

S. Subramani, Ravi Manjithaya, J. Farré, 2010, FEBS letters.

Roles of Pichia pastoris Uvrag in vacuolar protein sorting and the phosphatidylinositol 3-kinase complex in phagophore elongation in autophagy pathways

S. Subramani, Ravi Manjithaya, J. Farré, 2010, Autophagy.

Turnover of organelles by autophagy in yeast.

M. Thumm, R. Krick, Suresh Subramani, 2009, Current opinion in cell biology.

Atg28, a Novel Coiled-Coil Protein Involved in Autophagic Degradation of Peroxisomes in the Methylotrophic Yeast Pichia pastoris

J. Cregg, S. Subramani, A. Sibirny, 2006, Autophagy.

Peroxisome turnover by micropexophagy: an autophagy-related process.

S. Subramani, J. Farré, Jean-Claude Farré, 2004, Trends in cell biology.

Phosphorylation of mitophagy and pexophagy receptors coordinates their interaction with Atg8 and Atg11

S. Subramani, Aaron Burkenroad, J. Farré, 2013, EMBO reports.

cis Recognition Elements in Plant Mitochondrion RNA Editing

J. Farré, X. Jordana, A. Araya, 2001, Molecular and Cellular Biology.

Active Interaction Mapping Reveals the Hierarchical Organization of Autophagy.

Trey Ideker, Rama Balakrishnan, J Michael Cherry, 2017, Molecular cell.

A yeast MAPK cascade regulates pexophagy but not other autophagy pathways

S. Subramani, Ravi Manjithaya, J. Farré, 2010, The Journal of cell biology.

Guidelines for the use and interpretation of assays for monitoring autophage

T. P. Neufeld, Thomas J. Begley, H. Coller, 2012 .

Mechanistic insights into selective autophagy pathways: lessons from yeast

S. Subramani, J. Farré, Jean-Claude Farré, 2016, Nature Reviews Molecular Cell Biology.

Rallying the Exocyst as an Autophagy Scaffold

S. Subramani, Jean-Claude Farré, 2011, Cell.

A New Yeast Peroxin, Pex36, a Functional Homolog of Mammalian PEX16, Functions in the ER-to-Peroxisome Traffic of Peroxisomal Membrane Proteins.

J. Cregg, S. Subramani, A. Till, 2017, Journal of molecular biology.

S. Subramani, A. Sibirny, J. Farré, 2007, Autophagy.

A Cytoplasm to Vacuole Targeting Pathway in P. pastoris

S. Subramani, J. Farré, J. Vidal, 2007, Autophagy.

Balancing the Opposing Principles That Govern Peroxisome Homeostasis.

S. Subramani, J. Farré, Shanmugam Mahalingam, 2020, Trends in biochemical sciences.

Peroxisome biogenesis, membrane contact sites, and quality control

S. Subramani, Marco Proietto, J. Farré, 2018, EMBO reports.

Peroxisomal Pex3 Activates Selective Autophagy of Peroxisomes via Interaction with the Pexophagy Receptor Atg30*

S. Subramani, J. Farré, T. Y. Nazarko, 2015, The Journal of Biological Chemistry.

Atg35, a micropexophagy-specific protein that regulates micropexophagic apparatus formation in Pichia pastoris

J. Cregg, S. Subramani, D. Warnecke, 2011, Autophagy.

The autophagic degradation of cytosolic pools of peroxisomal proteins by a new selective pathway

Xiaofeng Wang, S. Subramani, Xuezhi Li, 2019, Autophagy.

TRIM37, a novel E3 ligase for PEX5-mediated peroxisomal matrix protein import

Wei Wang, S. Subramani, J. Farré, 2017, The Journal of cell biology.

In organello gene expression and RNA editing studies by electroporation-mediated transformation of isolated plant mitochondria.

J. Farré, A. Araya, D. Choury, 2007, Methods in enzymology.

RNA Editing in Mitochondrial Trans-Introns Is Required for Splicing

J. Farré, A. Araya, B. Castandet, 2012, PloS one.

Gene expression in isolated plant mitochondria: high fidelity of transcription, splicing and editing of a transgene product in electroporated organelles.

J. Farré, A. Araya, Jean-Claude Farré, 2001, Nucleic acids research.

The mat-r open reading frame is transcribed from a non-canonical promoter and contains an internal promoter to co-transcribe exonsnad1e and nad5III in wheat mitochondria

J. Farré, A. Araya, Jean-Claude Farré, 1999, Plant Molecular Biology.

Editing status of mat-r transcripts in mitochondria from two plant species: C-to-U changes occur in putative functional RT and maturase domains

A. Mercado, J. Farré, L. Holuigue, 1998, Current Genetics.

RNA splicing in higher plant mitochondria: determination of functional elements in group II intron from a chimeric cox II gene in electroporated wheat mitochondria.

J. Farré, A. Araya, Jean-Claude Farré, 2002, The Plant journal : for cell and molecular biology.

Localization of proteins and organelles using fluorescence microscopy.

S. Subramani, J. Farré, K. Booher, 2007, Methods in molecular biology.

Gene expression studies in isolated mitochondria: Solanum tuberosum rps10 is recognized by cognate potato but not by the transcription, splicing and editing machinery of wheat mitochondria

J. Farré, X. Jordana, A. Araya, 2005, Nucleic acids research.

Different patterns in the recognition of editing sites in plant mitochondria.

J. Farré, X. Jordana, A. Araya, 2004, Nucleic acids research.

OXPHOS deficiencies affect peroxisome proliferation by downregulating genes controlled by the SNF1 signaling pathway

S. Subramani, J. Farré, Krypton Carolino, 2021, bioRxiv.