Claudia Andreini

发表

Counting the zinc-proteins encoded in the human genome.

Antonio Rosato, Ivano Bertini, Claudia Andreini, 2006, Journal of proteome research.

Differential Effects of Iron, Zinc, and Copper on Dictyostelium discoideum Cell Growth and Resistance to Legionella pneumophila

S. Bozzaro, E. Bracco, C. Andreini, 2018, Front. Cell. Infect. Microbiol..

Metal ions in biological catalysis: from enzyme databases to general principles

Janet M. Thornton, Gemma L. Holliday, Ivano Bertini, 2008, JBIC Journal of Biological Inorganic Chemistry.

The Intriguing Role of Iron-Sulfur Clusters in the CIAPIN1 Protein Family

C. Andreini, S. Ciofi‐Baffoni, Claudia Andreini, 2022, Inorganics.

Merit Award Winners

Paolo Frasconi, Andrea Passerini, Antonio Rosato, 2004, BMC Bioinformatics.

The Relationship between Environmental Dioxygen and Iron-Sulfur Proteins Explored at the Genome Level

A. Rosato, L. Banci, C. Andreini, 2017, PloS one.

The human iron-proteome.

A. Rosato, L. Banci, C. Andreini, 2018, Metallomics : integrated biometal science.

Hidden relationships between metalloproteins unveiled by structural comparison of their metal sites

Yana Valasatava, Antonio Rosato, Claudia Andreini, 2015, Scientific Reports.

MetalPDB: a database of metal sites in biological macromolecular structures

Gabriele Cavallaro, Antonio Rosato, Claudia Andreini, 2012, Nucleic Acids Res..

Minimal Functional Sites Allow a Classification of Zinc Sites in Proteins

Ivano Bertini, Claudia Andreini, I. Bertini, 2011, PloS one.

Metalloproteomes: a bioinformatic approach.

Antonio Rosato, Ivano Bertini, Claudia Andreini, 2009, Accounts of chemical research.

Predicting zinc binding at the proteome level

P. Frasconi, A. Rosato, S. Menchetti, 2007, BMC Bioinformatics.

A hint to search for metalloproteins in gene banks

Antonio Rosato, Ivano Bertini, Claudia Andreini, 2004, Bioinform..

HIV-1 Tat Promotes Integrin-Mediated HIV Transmission to Dendritic Cells by Binding Env Spikes and Competes Neutralization by Anti-HIV Antibodies

R. Rappuoli, K. Montin, F. Dallocchio, 2012, PloS one.

Zinc through the three domains of life.

Antonio Rosato, Ivano Bertini, Claudia Andreini, 2006, Journal of proteome research.

Exploiting Bacterial Operons To Illuminate Human Iron-Sulfur Proteins.

A. Rosato, L. Banci, C. Andreini, 2016, Journal of proteome research.

HIV-1 Tat Protein Enters Dysfunctional Endothelial Cells via Integrins and Renders Them Permissive to Virus Replication

M. Falchi, L. Banci, O. Picconi, 2020, International journal of molecular sciences.

Occurrence of copper proteins through the three domains of life: a bioinformatic approach.

Antonio Rosato, Ivano Bertini, Claudia Andreini, 2008, Journal of proteome research.

A New Paradigm of Multiheme Cytochrome Evolution by Grafting and Pruning Protein Modules

C. Andreini, R. Louro, C. Paquete, 2022, bioRxiv.

Structural analysis of metal sites in proteins: non-heme iron sites as a case study.

Janet M Thornton, Ivano Bertini, Claudia Andreini, 2009, Journal of molecular biology.

Upgraded AMBER Force Field for Zinc-Binding Residues and Ligands for Predicting Structural Properties and Binding Affinities in Zinc-Proteins

A. Rosato, P. Procacci, M. Pagliai, 2020, ACS omega.

MetalPDB in 2018: a database of metal sites in biological macromolecular structures

Antonio Rosato, Claudia Andreini, Lucia Banci, 2017, Nucleic Acids Res..

To what extent do structural changes in catalytic metal sites affect enzyme function?

J. Thornton, A. Rosato, Nicholas Furnham, 2018, Journal of inorganic biochemistry.

Multi-metal Restriction by Calprotectin Impacts De Novo Flavin Biosynthesis in Acinetobacter baumannii.

Eric P. Skaar, D. Giedroc, W. Chazin, 2019, Cell chemical biology.

A bioinformatics view of zinc enzymes.

I. Bertini, C. Andreini, Claudia Andreini, 2012, Journal of inorganic biochemistry.

Metal-induced structural variability of mononuclear metal-binding sites from a database perspective.

A. Rosato, C. Andreini, Milana Bazayeva, 2022, Journal of Inorganic Biochemistry.

Hunting down zinc(II)-binding sites in proteins with distance matrices

Milana Bazayeva, Vincenzo Laveglia, Claudia Andreini, 2023, Bioinform..

MetalS2: A Tool for the Structural Alignment of Minimal Functional Sites in Metal-Binding Proteins and Nucleic Acids

Gabriele Cavallaro, Yana Valasatava, Antonio Rosato, 2013, J. Chem. Inf. Model..

Metal-MACiE: a database of metals involved in biological catalysis

Janet M. Thornton, Gemma L. Holliday, Gabriele Cavallaro, 2009, Bioinform..

MACiE: exploring the diversity of biochemical reactions

Gemma L. Holliday, William R. Pearson, Syed Asad Rahman, 2011, Nucleic Acids Res..

Structural Bioinformatics and Deep Learning of Metalloproteins: Recent Advances and Applications

A. Rosato, C. Andreini, Claudia Andreini, 2022, International journal of molecular sciences.

MetalPredator: a web server to predict iron-sulfur cluster binding proteomes

Yana Valasatava, Antonio Rosato, Claudia Andreini, 2016, Bioinform..

The cellular economy of the Saccharomyces cerevisiae zinc proteome.

J. Coon, D. Eide, L. Banci, 2018, Metallomics : integrated biometal science.

Identification of the zinc, copper and cadmium metalloproteome of the protozoon Tetrahymena thermophila by systematic bioinformatics

Christos T. Chasapis, A. Vlamis-Gardikas, C. Andreini, 2017, Archives of Microbiology.

MetalS3, a database-mining tool for the identification of structurally similar metal sites

Yana Valasatava, Antonio Rosato, Claudia Andreini, 2014, JBIC Journal of Biological Inorganic Chemistry.

FindGeo: a tool for determining metal coordination geometry

Gabriele Cavallaro, Claudia Andreini, Serena Lorenzini, 2012, Bioinform..

Comparative analysis of the ADAM and ADAMTS families.

A. Rosato, I. Bertini, L. Banci, 2005, Journal of proteome research.

Ruthenium(II) Polypyridyl Complexes and Metronidazole Derivatives: A Powerful Combination in the Design of Photoresponsive Antibacterial Agents Effective under Hypoxic Conditions

M. Pagliai, C. Giorgi, C. Andreini, 2023, Inorganic chemistry.