Mark Gerstein

发表

The packing density in proteins: standard radii and volumes.

Jerry Tsai, Robin Taylor, Cyrus Chothia, 1999, Journal of molecular biology.

Digging for dead genes: an analysis of the characteristics of the pseudogene population in the Caenorhabditis elegans genome.

M. Gerstein, P. Harrison, N. Echols, 2001, Nucleic acids research.

Proteomics of Mycoplasma genitalium: identification and characterization of unannotated and atypical proteins in a small model genome.

M. Gerstein, S. Balasubramanian, L. Regan, 2000, Nucleic acids research.

Structural Genomics: Current Progress

M. Gerstein, G. Montelione, A. Edwards, 2003, Science.

Analysis of protein loop closure. Two types of hinges produce one motion in lactate dehydrogenase.

M Gerstein, C Chothia, C. Chothia, 1991, Journal of molecular biology.

Advances in structural genomics.

M Gerstein, C Chothia, C. Chothia, 1999, Current opinion in structural biology.

SURVEY AND SUMMARY The morph server: a standardized system for analyzing and visualizing macromolecular motions in a database framework

W. G. Krebs, Mark Gerstein, 2000 .

Packing at the protein-water interface.

M Gerstein, C Chothia, C. Chothia, 1996, Proceedings of the National Academy of Sciences of the United States of America.

SPINE 2: a system for collaborative structural proteomics within a federated database framework.

G. Montelione, N. Lan, D. Milburn, 2003, Nucleic acids research.

Domain closure in adenylate kinase. Joints on either side of two helices close like neighboring fingers.

M Gerstein, C Chothia, C. Chothia, 1993, Journal of molecular biology.

$\zeta$-QVAE: A Quantum Variational Autoencoder utilizing Regularized Mixed-state Latent Representations

Prashant S. Emani, Mark Gerstein, Gaoyuan Wang, 2024, 2402.17749.

Domain closure in lactoferrin. Two hinges produce a see-saw motion between alternative close-packed interfaces.

M Gerstein, B F Anderson, E N Baker, 1993, Journal of molecular biology.

Assessing annotation transfer for genomics: quantifying the relations between protein sequence, structure and function through traditional and probabilistic scores.

M. Gerstein, C. A. Wilson, J. Kreychman, 2000, Journal of molecular biology.

Integration of genomic datasets to predict protein complexes in yeast

M. Gerstein, J. Qian, N. Lan, 2004, Journal of Structural and Functional Genomics.