Ivan Jakovlić

发表

In silico characterisation, homology modelling and structure-based functional annotation of blunt snout bream (Megalobrama amblycephala) Hsp70 and Hsc70 proteins

I. Jakovlić, Weimin Wang, N. T. Tran, 2015, Journal of animal science and technology.

Transcriptomics, metabolomics and histology indicate that high-carbohydrate diet negatively affects the liver health of blunt snout bream (Megalobrama amblycephala)

Han Liu, I. Jakovlić, Weimin Wang, 2017, BMC Genomics.

Evidence for Adaptive Selection in the Mitogenome of a Mesoparasitic Monogenean Flatworm Enterogyrus malmbergi

S. Wu, H. Zou, Ming Li, 2019, Genes.

Metabolite and gene expression profiles suggest a putative mechanism through which high dietary carbohydrates reduce the content of hepatic betaine in Megalobrama amblycephala

Jia Xu, Jun-tao Li, Weimin Wang, 2018, Metabolomics.

The mitochondrial genome of Heterosentis pseudobagri (Wang & Zhang, 1987) Pichelin & Cribb, 1999 reveals novel aspects of tRNA genes evolution in Acanthocephala

I. Jakovlić, Hao Wu, R. Song, 2023, BMC Genomics.

Drivers of interlineage variability in mitogenomic evolutionary rates in flatworms (Platyhelminthes) are multifactorial

H. Zou, Dong Zhang, I. Jakovlić, 2022, bioRxiv.

Inverted base composition skews and discontinuous mitochondrial genome architecture evolution in the Enoplea (Nematoda)

H. Zou, Ming Li, I. Jakovlić, 2022, BMC genomics.

Evolutionary rates of mitochondrial sequences and gene orders in Spirurina (Nematoda) are episodic but synchronised

H. Zou, Ming Li, I. Jakovlić, 2022, Water Biology and Security.

Disrupted architecture and fast evolution of the mitochondrial genome of Argeia pugettensis (Isopoda): implications for speciation and fitness

I. Jakovlić, Jianmei An, Junli Jia, 2020, BMC Genomics.

Evolutionary history of inversions in the direction of architecture-driven mutational pressures in crustacean mitochondrial genomes

H. Zou, Dong Zhang, I. Jakovlić, 2020, bioRxiv.

Architectural instability, inverted skews and mitochondrial phylogenomics of Isopoda: outgroup choice affects the long-branch attraction artefacts

H. Zou, Ming Li, Dong Zhang, 2020, Royal Society Open Science.

Disentangling the interplay of positive and negative selection forces that shaped mitochondrial genomes of Gammarus pisinnus and Gammarus lacustris

X. Ge, Jian Zhu, F. Al-Misned, 2020, Royal Society Open Science.

Mitochondrial Architecture Rearrangements Produce Asymmetrical Nonadaptive Mutational Pressures That Subvert the Phylogenetic Reconstruction in Isopoda

F. Al-Misned, S. Mahboob, K. Al-Ghanim, 2019, bioRxiv.

Expression of Hox paralog group 13 genes in adult and developing Megalobrama amblycephala.

I. Jakovlić, Weimin Wang, Ivan Jakovlić, 2016, Gene expression patterns : GEP.

1H NMR-based metabolomics approach reveals metabolic alterations in response to dietary imbalances in Megalobrama amblycephala

I. Jakovlić, Weimin Wang, Yu-Hua Zhao, 2017, Metabolomics.

Dietary betaine reduces liver lipid accumulation via improvement of bile acid and trimethylamine-N-oxide metabolism in blunt-snout bream.

Jia Xu, I. Jakovlić, Weimin Wang, 2019, Food & function.

The Role of Intestinal Microbiota in Regulating the Metabolism of Bile Acids Is Conserved Across Vertebrates

Fan Xiong, S. Wu, H. Zou, 2022, Frontiers in Microbiology.

Molecular cloning and expression of toll-like receptor 4 (tlr4) in the blunt snout bream (Megalobrama amblycephala).

Han Liu, I. Jakovlić, Weimin Wang, 2016, Developmental and comparative immunology.

PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies

Wen X Li, Dong Zhang, Jin Zhang, 2019, Molecular ecology resources.

Host's P85α genotype restructures the gut microbiota and regulates fat metabolism in gibel carp

S. Wu, H. Zou, Ming Li, 2022, Aquaculture.

Slow crabs ‐ fast genomes: Locomotory capacity predicts skew magnitude in crustacean mitogenomes

Jianquan Liu, H. Zou, Dong Zhang, 2021, Molecular ecology.

Molecular identification and functional characterisation of the interferon regulatory factor 1 in the blunt snout bream (Megalobrama amblycephala).

Han Liu, I. Jakovlić, Weimin Wang, 2016, Fish & shellfish immunology.

Dietary Bile Salt Types Influence the Composition of Biliary Bile Acids and Gut Microbiota in Grass Carp

Fan Xiong, S. Wu, H. Zou, 2018, Front. Microbiol..

Positive selection-driven fixation of a hominin-specific amino acid mutation related to dephosphorylation in IRF9

I. Jakovlić, Jianhai Chen, Xuefei He, 2022, BMC Ecology and Evolution.

Adhesion and colonization properties of potentially probiotic Bacillus paralicheniformis strain FA6 isolated from grass carp intestine

Fan Xiong, S. Wu, I. Jakovlić, 2019, Fisheries Science.

PhyloSuite: an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies

Jin Zhang, Dong Zhang, Hong Zou, 2018, bioRxiv.

Succession and Fermentation Products of Grass Carp (Ctenopharyngodon idellus) Hindgut Microbiota in Response to an Extreme Dietary Shift

Fan Xiong, S. Wu, H. Zou, 2017, Front. Microbiol..

The first report of diablo in Megalobrama amblycephala: characterization, phylogenetic analysis, functional annotation and expression

I. Jakovlić, Weimin Wang, N. T. Tran, 2017, Journal of Genetics.

The complete mitochondrial genome of parasitic nematode Camallanus cotti: extreme discontinuity in the rate of mitogenomic architecture evolution within the Chromadorea class

H. Zou, Gui-tang Wang, Dong Zhang, 2017, BMC Genomics.

Sequencing of the complete mitochondrial genomes of eight freshwater snail species exposes pervasive paraphyly within the Viviparidae family (Caenogastropoda)

Dong Zhang, I. Jakovlić, Weimin Wang, 2017, PloS one.

Sequencing, characterization and phylogenomics of the complete mitochondrial genome of Dactylogyrus lamellatus (Monogenea: Dactylogyridae)

H. Zou, G. Wang, R. Chen, 2017, Journal of Helminthology.

Life History Traits, Elasticity Analyses, and Phenotypic Plasticity of Squaliobarbus curriculus in the Pearl River Estuary, China

I. Jakovlić, Peng Wu, Yong Liu, 2021, Frontiers in Environmental Science.

Reproductive strategy of the invasive sharpbelly, Hemiculter leucisculus (Basilewsky 1855), in Erhai Lake, China.

D. Huang, I. Jakovlić, T. Wang, 2016 .

Homoplasy or plesiomorphy? Reconstruction of the evolutionary history of mitochondrial gene order rearrangements in the subphylum Neodermata.

S. Wu, H. Zou, Ming Li, 2019, International journal for parasitology.

Geography, phylogeny and host switch drive the coevolution of parasitic Gyrodactylus flatworms and their hosts

Hong-Peng Lei, Dong Zhang, Ivan Jakovlić, 2024, Parasites & vectors.

Identification, origin and evidence for retained functionality of two IκBα paralogs in Megalobrama amblycephala.

Han Liu, I. Jakovlić, Weimin Wang, 2016, Developmental and comparative immunology.

Blunt Snout Bream (Megalobrama amblycephala) MyD88 and TRAF6: Characterisation, Comparative Homology Modelling and Expression

I. Jakovlić, Weimin Wang, N. T. Tran, 2015, International journal of molecular sciences.

Identification, characterization and expression in response to Aeromonas hydrophila challenge of five interferon regulatory factors in Megalobrama amblycephala

I. Jakovlić, Weimin Wang, F. Zhan, 2019, Fish & shellfish immunology.

Whole-genome sequencing identifies rare missense variants of WNT16 and ERVW-1 causing the systemic lupus erythematosus.

X. Wang, Haidi Chen, Yongkang Wu, 2022, Genomics.

First record of round goby, Neogobius melanostomus (Pallas, 1814) in the Sava River, Croatia

I. Jakovlić, N. Šprem, M. Piria, 2011 .

The nanopore sequencing of a Chinese rhesus macaque revealed patterns of methylation, recombination, and selection for structural variations

Hao Yang, C. Fan, I. Jakovlić, 2022, bioRxiv.

Gene expression patterns indicate that a high-fat-high-carbohydrate diet causes mitochondrial dysfunction in fish.

I. Jakovlić, Weimin Wang, Shaokui Yi, 2019, Genome.

Regulation of lipid metabolism by gut microbiota in aquatic animals

S. Wu, H. Zou, I. Jakovlić, 2023, Reviews in Aquaculture.

Impacts of diet on hindgut microbiota and short-chain fatty acids in grass carp (Ctenopharyngodon idellus )

S. Wu, H. Zou, Wen X Li, 2017 .

Identification of neuropeptides from eyestalk transcriptome profiling analysis of female oriental river prawn (Macrobrachium nipponense) under hypoxia and reoxygenation conditions.

X. Ge, H. Fu, H. Qiao, 2019, Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology.

Drivers of interlineage variability in mitogenomic evolutionary rates in Platyhelminthes.

Dong Zhang, Tong Ye, Ivan Jakovlić, 2024, Heredity.

Strong mitonuclear discordance in the phylogeny of Neodermata and evolutionary rates of Polyopisthocotylea.

H. Zou, Dong Zhang, Chuan-Yu Xiang, 2024, International journal for parasitology.

Mitogenomic evolutionary rates in bilateria are influenced by parasitic lifestyle and locomotory capacity

H. Zou, Dong Zhang, Chuan-Yu Xiang, 2023, Nature communications.

Parasitism and locomotory capacity calibrate the mitogenomic evolutionary rates in Bilateria

H. Zou, Xiang Liu, I. Jakovlić, 2023, bioRxiv.

Chemotactic effect of &bgr;‐defensin 1 on macrophages in Megalobrama amblycephala

Xiaoling Liu, I. Jakovlić, Jianguo Su, 2018, Fish & shellfish immunology.

Mitochondrial genomes of two diplectanids (Platyhelminthes: Monogenea) expose paraphyly of the order Dactylogyridea and extensive tRNA gene rearrangements

S. Wu, H. Zou, Ming Li, 2018, Parasites & Vectors.

Recent invasion and low level of divergence between diploid and triploid forms of Carassius auratus complex in Croatia

J. Gui, Ivan Jakovlić, 2011, Genetica.