Christian H. Gauthier

发表

PhaMMseqs: a new pipeline for constructing phage gene phamilies using MMseqs2

Steven G. Cresawn, G. Hatfull, Christian Gauthier, 2022, G3.

The heterogenous and diverse population of prophages in Mycobacterium genomes

D. Jacobs-Sera, Lawrence Abad, Christian H. Gauthier, 2023, mSystems.

Mycobacterium abscessus Strain Morphotype Determines Phage Susceptibility, the Repertoire of Therapeutically Useful Phages, and Phage Resistance

G. Hatfull, D. Russell, D. Jacobs-Sera, 2021, mBio.

PhamClust: a phage genome clustering tool using proteomic equivalence

Christian H. Gauthier, Graham F. Hatfull, 2023, mSystems.

Unusual prophages in Mycobacterium abscessus genomes and strain variations in phage susceptibilities

E. Rubin, G. Hatfull, D. Russell, 2023, PloS one.

DEPhT: a novel approach for efficient prophage discovery and precise extraction

G. Hatfull, D. Russell, Christian Gauthier, 2022, Nucleic acids research.

The Prophage and Plasmid Mobilome as a Likely Driver of Mycobacterium abscessus Diversity

G. Hatfull, D. Russell, D. Jacobs-Sera, 2021, mBio.

pdm_utils: a SEA-PHAGES MySQL phage database management toolkit

Charles A. Bowman, Steven G. Cresawn, Travis N Mavrich, 2020, Bioinform..

A Bioinformatic Ecosystem for Bacteriophage Genomics: PhaMMSeqs, Phamerator, pdm_utils, PhagesDB, DEPhT, and PhamClust

Christian H. Gauthier, Graham F. Hatfull, 2024, Viruses.

The Prophage and Plasmid Mobilome as a Likely Driver of Mycobacterium abscessus Diversity

D. Russell, D. Jacobs-Sera, R. Dedrick, 2021 .