Jim R. Hughes

Dynamics of the 4D genome during in vivo lineage specification and differentiation

Daniel Hidalgo, M. Socolovsky, J. Telenius, 2020, Nature Communications.

Dissection of the 4D chromatin structure of the α-globin locus through in vivo erythroid differentiation with extreme spatial and temporal resolution

Daniel Hidalgo, M. Socolovsky, Matthew E. Gosden, 2019, bioRxiv.

A revised model for promoter competition based on multi-way chromatin interactions at the α-globin locus

J. Hughes, D. Higgs, A. M. Oudelaar, 2019, Nature Communications.

CaptureCompendium: a comprehensive toolkit for 3C analysis

J. Telenius, R. Schwessinger, D. Downes, 2020, bioRxiv.

Single-cell chromatin interactions reveal regulatory hubs in dynamic compartmentalized domains

J. Dekker, J. Telenius, R. Schwessinger, 2018, bioRxiv.

CATCH-UP: A High-Throughput Upstream-Pipeline for Bulk ATAC-Seq and ChIP-Seq Data.

Matthew Baxter, E. Georgiades, Jim R. Hughes, 2023, Journal of visualized experiments : JoVE.