Jun Inoue

发表

Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences.

J. Inoue, M. Miya, M. Nishida, 2003, Molecular phylogenetics and evolution.

Complete mitochondrial DNA sequence of the Japanese sardine Sardinops melanostictus

J. Inoue, M. Miya, K. Tsukamoto, 2000 .

A key metabolic gene for recurrent freshwater colonization and radiation in fishes

A. Toyoda, A. Ishikawa, J. Inoue, 2019, Science.

Mitochondrial Genomics of Ostariophysan Fishes: Perspectives on Phylogeny and Biogeography

J. Inoue, M. Miya, M. Nishida, 2003, Journal of Molecular Evolution.

Rapid genome reshaping by multiple-gene loss after whole-genome duplication in teleost fish suggested by mathematical modeling

Katsumi Tsukamoto, Yukuto Sato, Jun G. Inoue, 2015, Proceedings of the National Academy of Sciences.

ORTHOSCOPE: An Automatic Web Tool for Phylogenetically Inferring Bilaterian Orthogroups with User-Selected Taxa

J. Inoue, N. Satoh, Jun Inoue, 2018, Molecular biology and evolution.

Basal actinopterygian relationships: a mitogenomic perspective on the phylogeny of the "ancient fish".

Katsumi Tsukamoto, Mutsumi Nishida, J. Inoue, 2003, Molecular phylogenetics and evolution.

Repertoires of G protein-coupled receptors for Ciona-specific neuropeptides

Yasushi Okuno, Akira Shiraishi, Y. Okuno, 2019, Proceedings of the National Academy of Sciences.

Evolutionary Origin of the Scombridae (Tunas and Mackerels): Members of a Paleogene Adaptive Radiation with 14 Other Pelagic Fish Families

J. Inoue, M. Miya, M. Nishida, 2013, PloS one.

Interrelationships of the 11 gasterosteiform families (sticklebacks, pipefishes, and their relatives): a new perspective based on whole mitogenome sequences from 75 higher teleosts.

J. Inoue, M. Miya, M. Nishida, 2008, Molecular phylogenetics and evolution.

Evolution of the deep-sea gulper eel mitochondrial genomes: large-scale gene rearrangements originated within the eels.

J. Inoue, M. Miya, K. Tsukamoto, 2003, Molecular biology and evolution.

Complete Mitochondrial DNA Sequence of Conger myriaster (Teleostei: Anguilliformes): Novel Gene Order for Vertebrate Mitochondrial Genomes and the Phylogenetic Implications for Anguilliform Families

J. Inoue, M. Miya, K. Tsukamoto, 2001, Journal of Molecular Evolution.

Title: Best Practices for Justifying Fossil Calibrations

Randall B. Irmis, Michael J. Benton, James F. Parham, 2011 .

Eighteen Coral Genomes Reveal the Evolutionary Origin of Acropora Strategies to Accommodate Environmental Changes

J. Inoue, N. Satoh, K. Khalturin, 2020, Molecular biology and evolution.

The historical biogeography of the freshwater knifefishes using mitogenomic approaches: a mesozoic origin of the Asian notopterids (Actinopterygii: Osteoglossomorpha).

J. Inoue, M. Miya, M. Nishida, 2009, Molecular phylogenetics and evolution.

A mitogenomic perspective on the basal teleostean phylogeny: resolving higher-level relationships with longer DNA sequences.

J. Inoue, M. Miya, K. Tsukamoto, 2001, Molecular phylogenetics and evolution.

Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny

Masami Hasegawa, Robert J Asher, Philip C J Donoghue, 2012, Proceedings of the Royal Society B: Biological Sciences.

The impact of the representation of fossil calibrations on Bayesian estimation of species divergence times.

Philip C J Donoghue, Ziheng Yang, Ziheng Yang, 2010, Systematic biology.

Divergence time of the two regional medaka populations in Japan as a new time scale for comparative genomics of vertebrates

J. Inoue, M. Miya, M. Nishida, 2009, Biology Letters.

The mitochondrial genome of spotted green pufferfish Tetraodon nigroviridis (Teleostei: Tetraodontiformes) and divergence time estimation among model organisms in fishes.

J. Inoue, M. Miya, M. Nishida, 2006, Genes & genetic systems.

The mitochondrial genome of Indonesian coelacanth Latimeria menadoensis (Sarcopterygii: Coelacanthiformes) and divergence time estimation between the two coelacanths.

B. Venkatesh, J. Inoue, M. Miya, 2005, Gene.

Body plan convergence in the evolution of skates and rays (Chondrichthyes: Batoidea).

M. Miya, M. Nishida, G. Naylor, 2012, Molecular phylogenetics and evolution.

Identification of ancient viruses from metagenomic data of the Jomon people

J. Inoue, I. Inoue, H. Nakaoka, 2020, Journal of Human Genetics.

dbCNS: A New Database for Conserved Noncoding Sequences

N. Saitou, J. Inoue, Jun Inoue, 2020, Molecular biology and evolution.

Two Hidden mtDNA-Clades of Crown-of-Thorns Starfish in the Pacific Ocean

J. Inoue, M. Nishida, Z. Forsman, 2022, Frontiers in Marine Science.

Genetic differentiation in the genus Uroconger in the Indo-Pacific region

Michael J. Miller, J. Inoue, K. Tsukamoto, 2008 .

Evolutionary origin and phylogeny of the modern holocephalans (Chondrichthyes: Chimaeriformes): a mitogenomic perspective.

B. Venkatesh, B. Tay, J. Inoue, 2010, Molecular biology and evolution.

A draft genome of the striped catfish, Pangasianodon hypophthalmus, for comparative analysis of genes relevant to development and a resource for aquaculture improvement

Oanh T. P. Kim, J. Inoue, N. Satoh, 2018, BMC Genomics.

Phylogenetic Analyses of Glycosyl Hydrolase Family 6 Genes in Tunicates: Possible Horizontal Transfer

J. Inoue, N. Satoh, Kun-Lung Li, 2020, Genes.

An Investigation into the Genetic History of Japanese Populations of Three Starfish, Acanthaster planci, Linckia laevigata, and Asterias amurensis, Based on Complete Mitochondrial DNA Sequences

N. Satoh, Kanako Hisata, N. Yasuda, 2020, G3.

Interrelationships of Atherinomorpha (medakas, flyingfishes, killifishes, silversides, and their relatives): The first evidence based on whole mitogenome sequences.

Mutsumi Nishida, J. Inoue, M. Miya, 2008, Molecular phylogenetics and evolution.

Deep-ocean origin of the freshwater eels

Michael J. Miller, J. Inoue, M. Miya, 2010, Biology Letters.