Abhishek Sarkar

Separating measurement and expression models clarifies confusion in single-cell RNA sequencing analysis

Matthew Stephens, Abhishek Sarkar, M. Stephens, 2020, Nature Genetics.

Non-negative matrix factorization algorithms greatly improve topic model fits pdf

Matthew Stephens, Zihao Wang, Peter Carbonetto, 2021, ArXiv.

Genetic analysis of complex traits in the emerging Collaborative Cross.

Ivana V. Yang, Wei Wang, Leonard McMillan, 2011, Genome research.

A Bayesian approach to mediation analysis predicts 206 causal target genes in Alzheimer’s disease

Jose Davila-Velderrain, Manolis Kellis, Yongjin Park, 2017, bioRxiv.

Multi-tissue polygenic models for transcriptome-wide association studies

Manolis Kellis, Yongjin Park, Abhishek Sarkar, 2017, bioRxiv.

Evidence of reduced recombination rate in human regulatory domains

Manolis Kellis, Pouya Kheradpour, Abhishek Sarkar, 2017, Genome Biology.

Evidence of a recombination rate valley in human regulatory domains

Manolis Kellis, Abhishek Sarkar, Manolis Kellis, 2016, bioRxiv.