Yufei Huang

发表

Decoupling Weighing and Selecting for Integrating Multiple Graph Pre-training Tasks

Lirong Wu, Cheng Tan, Zhangyang Gao, 2024, 2403.01400.

Enhancing Protein Predictive Models via Proteins Data Augmentation: A Benchmark and New Directions

Lirong Wu, Stan Z. Li, Haitao Lin, 2024, ArXiv.

MAPE-PPI: Towards Effective and Efficient Protein-Protein Interaction Prediction via Microenvironment-Aware Protein Embedding

N. Chawla, Siyuan Li, Lirong Wu, 2024, ArXiv.

Re-Dock: Towards Flexible and Realistic Molecular Docking with Diffusion Bridge

Siyuan Li, Lirong Wu, Cheng Tan, 2024, ArXiv.

PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein Interaction Prediction

Lirong Wu, Cheng Tan, Zhangyang Gao, 2024, AAAI.

Protein 3D Graph Structure Learning for Robust Structure-based Protein Property Prediction

Siyuan Li, Lirong Wu, Zhangyang Gao, 2023, AAAI.

GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation

Lirong Wu, Haitao Lin, Yufei Huang, 2024, bioRxiv.

ECloudGen: Access to Broader Chemical Space for Structure-based Molecule Generation

Jintu Zhang, Odin Zhang, Jieyu Jin, 2024, bioRxiv.

Deep Geometry Handling and Fragment-wise Molecular 3D Graph Generation

P. Pan, Xujun Zhang, Zhenxing Wu, 2024, ArXiv.

CBGBench: Fill in the Blank of Protein-Molecule Complex Binding Graph

Siyuan Li, Lirong Wu, Guojiang Zhao, 2024, ArXiv.

Effectiveness and efficiency: label-aware hierarchical subgraph learning for protein-protein interaction

Lirong Wu, Haitao Lin, Yufei Huang, 2024, bioRxiv.