Liam H. Walsh

Analysis of the milk kefir pan-metagenome reveals four community types, core species, and associated metabolic pathways

Aaron M. Walsh, F. Crispie, Paul D. Cotter, 2023, iScience.

Kefir4All, a citizen science initiative to raise awareness of the roles that microbes play in food fermentation

F. Crispie, Paul W. O'Toole, José Guilherme Prado Martin, 2024, Journal of microbiology & biology education.

Comparison of the relative impacts of acute consumption of an inulin-enriched diet, milk kefir or a commercial probiotic product on the human gut microbiome and metabolome

Aaron M. Walsh, E. Holmes, I. García-Pérez, 2023, NPJ science of food.

Bioinformatic approaches for studying the microbiome of fermented food

Aaron M. Walsh, P. Cotter, P. O’Toole, 2022, Critical reviews in microbiology.

Cataloging metagenome-assembled genomes and microbial genes from the athlete gut microbiome

C. Walsh, C. Guinane, P. Cotter, 2024, Microbiome Research Reports.