Vasilis J. Promponas

发表

GeneViTo: Visualizing gene-product functional and structural features in genomic datasets

Georgios S. Vernikos, Christos G. Gkogkas, Vasilis J. Promponas, 2003, BMC Bioinformatics.

Convolutional Neural Networks in Combination with Support Vector Machines for Complex Sequential Data Classification

Vasilis J. Promponas, Chris Christodoulou, Antreas Dionysiou, 2018, ICANN.

BioTextQuest: a knowledge integration platform for literature mining and concept discovery

Reinhard Schneider, Christos A. Ouzounis, Georgios A. Pavlopoulos, 2014 .

CAST: an iterative algorithm for the complexity analysis of sequence tracts

Chris Sander, Anton J. Enright, Sophia Tsoka, 2000, Bioinform..

GPU technology as a platform for accelerating local complexity analysis of protein sequences

Theocharis Theocharides, Vasilis J. Promponas, Agathoklis Papadopoulos, 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

Evaluation of annotation strategies using an entire genome sequence

Miguel A. Andrade-Navarro, Alfonso Valencia, Anton J. Enright, 2003, Bioinform..

Training Bidirectional Recurrent Neural Network Architectures with the Scaled Conjugate Gradient Algorithm

Vasilis J. Promponas, Chris Christodoulou, Michalis Agathocleous, 2016, ICANN.

LCR-eXXXplorer: a web platform to search, visualize and share data for low complexity regions in protein sequences

Vasilis J. Promponas, Ioannis Kirmitzoglou, V. Promponas, 2015, Bioinform..

Editorial: Intelligent Biomedical Systems

Ilias Maglogiannis, Constantinos S. Pattichis, Vasilis J. Promponas, 2014, Int. J. Artif. Intell. Tools.

Developing and validating a pipeline for in silico functional classification of nitrilases based on sequence data

Vasilis J. Promponas, Eleni Fani Gkotsi, 2015 .

Reconfiguring the Bioinformatics Computational Spectrum: Challenges and Opportunities of FPGA-Based Bioinformatics Acceleration Platforms

Theocharis Theocharides, Ioannis Papaefstathiou, Vasilis J. Promponas, 2014, IEEE Design & Test.

CoPreTHi: A Web tool which combines transmembrane protein segment prediction methods

Vasilis J. Promponas, Stavros J. Hamodrakas, G. A. Palaios, 2009, Silico Biol..

Protein Secondary Structure Prediction with Bidirectional Recurrent Neural Nets: Can Weight Updating for Each Residue Enhance Performance?

Vasilis J. Promponas, Chris Christodoulou, Michalis Agathocleous, 2010, AIAI.

A web server to locate periodicities in a sequence

Vasilis J. Promponas, Stavros J. Hamodrakas, C. M. Pasquier, 1998, Bioinform..

Opportunities from the use of FPGAs as platforms for bioinformatics algorithms

Theocharis Theocharides, Vasilis J. Promponas, Apostolos Dollas, 2012, 2012 IEEE 12th International Conference on Bioinformatics & Bioengineering (BIBE).

FPGA-based hardware acceleration for local complexity analysis of massive genomic data

Theocharis Theocharides, Vasilis J. Promponas, Agathoklis Papadopoulos, 2013, Integr..

Towards systolic hardware acceleration for local complexity analysis of massive genomic data

Theocharis Theocharides, Vasilis J. Promponas, Agathoklis Papadopoulos, 2012, GLSVLSI '12.

Clustering of biological time series by cepstral coefficients based distances

Vasilis J. Promponas, Konstantinos Fokianos, Alexios Savvides, 2008, Pattern Recognit..

LaTcOm: a web server for visualizing rare codon clusters in coding sequences

Vasilis J. Promponas, Athina Theodosiou, V. Promponas, 2012, Bioinform..

Open source workflow systems in life sciences informatics

Constantinos S. Pattichis, Vasilis J. Promponas, Christos C. Kannas, 2012, 2012 IEEE 12th International Conference on Bioinformatics & Bioengineering (BIBE).

A Comparative Study on Filtering Protein Secondary Structure Prediction

Vasilis J. Promponas, Chris Christodoulou, Michalis Agathocleous, 2012, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

A workbench for computational analysis of protein sequence and structure on the Internet

Vasilis J. Promponas, Stavros J. Hamodrakas, Claude Pasquier, 2000 .

PRED-GPCR: GPCR recognition and family classification server

Vasilis J. Promponas, Stavros J. Hamodrakas, Pantelis G. Bagos, 2004, Nucleic Acids Res..

A simple clustering approach for pathogenic strain identification based on local and global amino acid compositional signatures from enomic sequences: the Escherichia genus case

Vasilis J. Promponas, 2009, 2009 9th International Conference on Information Technology and Applications in Biomedicine.

Experimental evidence validating the computational inference of functional associations from gene fusion events: a critical survey

Christos A. Ouzounis, Vasilis J. Promponas, Ioannis Iliopoulos, 2012, Briefings Bioinform..

Guest Editorial: Computational Solutions to Large-Scale Data Management and Analysis in Translational and Personalized Medicine

Nikolaos G. Bourbakis, Stephen T. C. Wong, Manolis Tsiknakis, 2014, IEEE J. Biomed. Health Informatics.

Sequence features of Compositionally Biased regions in three dimensional protein structures

Vasilis J. Promponas, Ioannis Kirmitzoglou, Stella Tamana, 2012, 2012 IEEE 12th International Conference on Bioinformatics & Bioengineering (BIBE).

Spectral density ratio based clustering methods for the binary segmentation of protein sequences: A comparative study

Vasilis J. Promponas, Konstantinos Fokianos, Alexis Ioannou, 2010, Biosyst..

A workflow system for virtual screening in cancer chemoprevention

Constantinos S. Pattichis, Vasilis J. Promponas, Zinonas C. Antoniou, 2012, 2012 IEEE 12th International Conference on Bioinformatics & Bioengineering (BIBE).

BioTextQuest: a web-based biomedical text mining suite for concept discovery

Christos A. Ouzounis, Vasilis J. Promponas, Stavros Nikolaou, 2011, Bioinform..

BioTextQuest+: a knowledge integration platform for literature mining and concept discovery.

Reinhard Schneider, Christos A. Ouzounis, Georgios A. Pavlopoulos, 2015, Bioinformatics.

DisProt: intrinsic protein disorder annotation in 2020

Silvio C. E. Tosatto, Arne Elofsson, Marco Necci, 2019, Nucleic Acids Res..

The Chlamydiales Pangenome Revisited: Structural Stability and Functional Coherence

Christos A. Ouzounis, Vasilis J. Promponas, Fotis E. Psomopoulos, 2012, Genes.

Annotation inconsistencies beyond sequence similarity-based function prediction – phylogeny and genome structure

Christos A. Ouzounis, Vasilis J. Promponas, Ioannis Iliopoulos, 2015, Standards in Genomic Sciences.

Functional Genomics Evidence Unearths New Moonlighting Roles of Outer Ring Coat Nucleoporins

Christos A. Ouzounis, Vasilis J. Promponas, Benjamin J. Blencowe, 2014, Scientific Reports.

Topology prediction of β-barrel outer membrane proteins

Vasilis J. Promponas, Stavros J. Hamodrakas, Pantelis G. Bagos, 2005 .