David J. Foran

发表

Collaborative marketplaces for eScience: A medical imaging use case

Xin Qi, Manish Parashar, Omer F. Rana, 2014, 2014 International Conference on Collaboration Technologies and Systems (CTS).

Robust Segmentation of Overlapping Cells in Histopathology Specimens Using Parallel Seed Detection and Repulsive Level Set

Lin Yang, Fuyong Xing, Xin Qi, 2012, IEEE Transactions on Biomedical Engineering.

A Semi-Automated Positioning System for Contact-Mode Atomic Force Microscopy (AFM)

Jaydev P. Desai, David J. Foran, Rajarshi Roy, 2013, IEEE Transactions on Automation Science and Engineering.

Engineering a peer-to-peer collaboratory for tissue microarray research

Manish Parashar, David J. Foran, Wenjin Chen, 2004, Proceedings of the Second International Workshop on Challenges of Large Applications in Distributed Environments, 2004. CLADE 2004..

Using Betweenness Centrality to Identify Manifold Shortcuts

David J. Foran, William J. Cukierski, William J. Cukierski, 2008, 2008 IEEE International Conference on Data Mining Workshops.

Content-based white blood cell retrieval on bright-field pathology images

Lin Yang, Xin Qi, David J. Foran, 2013, Medical Imaging.

Virtual Microscopy and Grid-Enabled Decision Support for Large-Scale Analysis of Imaged Pathology Specimens

Lin Yang, Peter Meer, David J. Foran, 2009, IEEE Transactions on Information Technology in Biomedicine.

Multiple Class Segmentation Using A Unified Framework over Mean-Shift Patches

Lin Yang, Peter Meer, David J. Foran, 2007, 2007 IEEE Conference on Computer Vision and Pattern Recognition.

PathMiner: A Web-Based Tool for Computer-Assisted Diagnostics in Pathology

Lin Yang, Peter Meer, David J. Foran, 2009, IEEE Transactions on Information Technology in Biomedicine.

Metamerism in multispectral imaging of histopathology specimens

David J. Foran, William J. Cukierski, William J. Cukierski, 2010, 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

Content-based histopathology image retrieval using CometCloud

Lin Yang, Fuyong Xing, Xin Qi, 2014, BMC Bioinformatics.

Chest X-ray image phase features for improved diagnosis of COVID-19 using convolutional neural network

Xiao Qi, David J. Foran, Ilker Hacihaliloglu, 2020, International Journal of Computer Assisted Radiology and Surgery.

Unsupervised Domain Adaptation for Classification of Histopathology Whole-Slide Images

David J. Foran, Jian Ren, Ilker Hacihaliloglu, 2019, Front. Bioeng. Biotechnol..

A deformable model for tracking tumors across consecutive imaging studies

David J. Foran, John L. Nosher, Gabriela Niculescu, 2009, International Journal of Computer Assisted Radiology and Surgery.

A Variational Framework for Partially Occluded Image Segmentation using Coarse to Fine Shape Alignment and Semi-Parametric Density Approximation

Lin Yang, David J. Foran, L. Yang, 2007, 2007 IEEE International Conference on Image Processing.

CBEx: A Hybrid Approach for Cancer Biomarker Extraction

David J. Foran, Xiangyu Gao, Wenjin Chen, 2020, 2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Exploring automatic prostate histopathology image gleason grading via local structure modeling

Xin Qi, David J. Foran, Jian Ren, 2015, 2015 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

Bimodal system for interactive indexing and retrieval of pathology images

Dorin Comaniciu, Peter Meer, David J. Foran, 1998, Proceedings Fourth IEEE Workshop on Applications of Computer Vision. WACV'98 (Cat. No.98EX201).

Computer aided analysis of prostate histopathology images Gleason grading especially for Gleason score 7

Xin Qi, David J. Foran, Jian Ren, 2015, 2015 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

A fast and accurate tracking algorithm of left ventricles in 3D echocardiography

Dorin Comaniciu, Lin Yang, Yefeng Zheng, 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

Computer aided analysis of prostate histopathology images to support a refined Gleason grading system

Xin Qi, David J. Foran, Jian Ren, 2017, Medical Imaging.

High Performance Computing Techniques for Scaling Image Analysis Workflows

Jun Kong, Tony Pan, Vijay Kumar, 2010, PARA.

HetroCV: Auto-tuning Framework and Runtime for Image Processing and Computer Vision Applications on Heterogeneous Platform

Xin Qi, Manish Parashar, David J. Foran, 2015, 2015 44th International Conference on Parallel Processing Workshops.

Automatic Image Analysis of Histopathology Specimens Using Concave Vertex Graph

Lin Yang, Peter Meer, David J. Foran, 2008, MICCAI.

Unsupervised imaging, registration and archiving of tissue microarrays

David J. Foran, Wenjin Chen, Michael Reiss, 2002, AMIA.

Medical imaging over a network of heterogenous X-servers

David J. Foran, Donald A. Winkelmann, Robert L. Trelstad, 1993, Proceedings of the 15th Annual International Conference of the IEEE Engineering in Medicine and Biology Societ.

Image mining for investigative pathology using optimized feature extraction and data fusion

Wei He, Peter Meer, David J. Foran, 2005, Comput. Methods Programs Biomed..

Image-guided decision support system for pathology

Dorin Comaniciu, Peter Meer, David J. Foran, 1999, Machine Vision and Applications.

Classification of hematologic malignancies using texton signatures

Lin Yang, Peter Meer, David J. Foran, 2007, Pattern Analysis and Applications.

Digitized tissue microarray classification using sparse reconstruction

Lin Yang, Fuyong Xing, Xin Qi, 2012, Medical Imaging.

Ranked retrieval of segmented nuclei for objective assessment of cancer gene repositioning

Prabhakar R. Gudla, Tom Misteli, David J. Foran, 2012, BMC Bioinformatics.

Electromechanical Coupling Factor of Breast Tissue as a Biomarker for Breast Cancer

Jaydev P. Desai, David J. Foran, Wenjin Chen, 2018, IEEE Transactions on Biomedical Engineering.

A Support Vector Machine based Prediction Model for Discrimination of Malignant Pulmonary Nodules from Benign Nodules

Yan Wu, David J. Foran, John L. Nosher, 2016, BIOIMAGING.

Decision support system for multiuser remote microscopy in telepathology

Dorin Comaniciu, Peter Meer, David J. Foran, 1999, Proceedings 12th IEEE Symposium on Computer-Based Medical Systems (Cat. No.99CB36365).

A caGrid-enabled, learning based image segmentation method for histopathology specimens

Jun Hu, Joel H. Saltz, Lin Yang, 2009, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

An adaptive tracking algorithm of lung tumors in fluoroscopy using online learned collaborative trackers

Casimir A. Kulikowski, Jinghao Zhou, Lin Yang, 2010, 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

A distributed health information network for consultative services in surgical pathology

David J. Foran, Robert L. Trelstad, Lauri Goodell, 1995, Proceedings of 17th International Conference of the Engineering in Medicine and Biology Society.

Unsupervised segmentation based on robust estimation and color active contour models

Peter Meer, David J. Foran, Lin Yang, 2005, IEEE Transactions on Information Technology in Biomedicine.

Robust automatic breast cancer staging using a combination of functional genomics and image-omics

Hai Su, Lin Yang, Fuyong Xing, 2015, 2015 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).

Automated image interpretation of digital chromatic images using multivariate statistics

David J. Foran, Richard A. Berg, 1992, 1992 14th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

Personalized Image Aesthetics

Radomír Mech, Zhe L. Lin, David J. Foran, 2017, 2017 IEEE International Conference on Computer Vision (ICCV).

Probabilistic Estimation of Mechanical Properties of Biomaterials Using Atomic Force Microscopy

Jaydev P. Desai, David J. Foran, Rajarshi Roy, 2014, IEEE Transactions on Biomedical Engineering.

High Throughput Analysis of Breast Cancer Specimens on the Grid

Lin Yang, Michael D. Feldman, Peter Meer, 2007, MICCAI.

A prototype for unsupervised analysis of tissue microarrays for cancer research and diagnostics

David J. Foran, Wenjin Chen, Michael Reiss, 2004, IEEE Transactions on Information Technology in Biomedicine.

TelemEDUcation: Textbooks, problem sets and digital exams

David J. Foran, R. L. Trelstad, J. Raskova, 1996 .

Comparative performance analysis of stained histopathology specimens using RGB and multispectral imaging

Lin Yang, Fuyong Xing, Xin Qi, 2011, Medical Imaging.

A comparative performance study characterizing breast tissue microarrays using standard RGB and multispectral imaging

David J. Foran, William J. Cukierski, Xin Qi, 2010, BiOS.

A distributed system for medical consultation and education

David J. Foran, R. L. Trelstad, Lauri Goodell, 1994, Proceedings of 16th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

Toward a Portable Cancer Diagnostic Tool Using a Disposable MEMS-Based Biochip

Jaydev P. Desai, David J. Foran, Wenjin Chen, 2016, IEEE Transactions on Biomedical Engineering.

The analysis of image feature robustness using cometcloud

Manish Parashar, Hyunjoo Kim, David J. Foran, 2012, Journal of pathology informatics.

Moving beyond color: The case for multispectral imaging in brightfield pathology

Xin Qi, David J. Foran, William J. Cukierski, 2009, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

Supporting Real-Time Jobs on the IBM Blue Gene/Q: Simulation-Based Study

Ian T. Foster, Manish Parashar, Rajkumar Kettimuthu, 2017, JSSPP.

A Clinically Motivated 2-Fold Framework for Quantifying and Classifying Immunohistochemically Stained Specimens

David J. Foran, Wenjin Chen, Michael Reiss, 2007, MICCAI.

Compression guidelines for diagnostic telepathology

Ivan Marsic, Peter Meer, David J. Foran, 1997, IEEE Transactions on Information Technology in Biomedicine.

for Interactive Indexing and Retrieval of Pat ology Images

Dorin Comaniciu, Peter Meer, David J. Foran, 1998 .

Decentralized Data Sharing of Tissue Microarrays for Investigative Research in Oncology

Manish Parashar, David J. Foran, Wenjin Chen, 2006, Cancer informatics.

Bimodal system for interactive indexing and retrieval of pathology images

Dorin Comaniciu, Peter Meer, David J. Foran, 1998, Proceedings Fourth IEEE Workshop on Applications of Computer Vision. WACV'98 (Cat. No.98EX201).

Parallel content-based sub-image retrieval using hierarchical searching

Joel H. Saltz, Lin Yang, Fuyong Xing, 2014, Bioinform..

Establishing perceptual criteria on image quality in diagnostic telepathology

Ivan Marsic, Casimir A. Kulikowski, Leiguang Gong, 1996, Proceedings of 3rd IEEE International Conference on Image Processing.

An Automated Means for Objectively Characterizing Bio-materials Containing Poorly Defined Features Using Computer Vision and Mathematical Morphometry

David J. Foran, Thomas E. Twardowski, 1996 .

A multicore based parallel image registration method

Hong Zhang, David J. Foran, John L. Nosher, 2009, 2009 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

Scalable analysis of Big pathology image data cohorts using efficient methods and high-performance computing strategies

Joel H. Saltz, Lin Yang, Fusheng Wang, 2015, BMC Bioinformatics.

Investigating the use of autonomic cloudbursts for high-throughput medical image registration

Lin Yang, Manish Parashar, Hyunjoo Kim, 2009, 2009 10th IEEE/ACM International Conference on Grid Computing.

Computer-assisted discrimination among malignant lymphomas and leukemia using immunophenotyping, intelligent image repositories, and telemicroscopy

Dorin Comaniciu, Peter Meer, David J. Foran, 2000, IEEE Transactions on Information Technology in Biomedicine.

Volumetry of hepatic metastases in computed tomography using the watershed and active contour algorithms

Peter J. Yim, David J. Foran, D. Foran, 2003, 16th IEEE Symposium Computer-Based Medical Systems, 2003. Proceedings..

Histological Slides Evaluated Using Statistical Image Processing

David J. Foran, R. A. Berg, C. Ruppert, 1990, [1990] Proceedings of the Twelfth Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

Shape-based image indexing and retrieval for diagnostic pathology

Dorin Comaniciu, Peter Meer, David J. Foran, 1998, Proceedings. Fourteenth International Conference on Pattern Recognition (Cat. No.98EX170).

ImageMiner: a software system for comparative analysis of tissue microarrays using content-based image retrieval, high-performance computing, and grid technology

Tony Pan, Jun Hu, Joel H. Saltz, 2011, J. Am. Medical Informatics Assoc..

Adversarial Domain Adaptation for Classification of Prostate Histopathology Whole-Slide Images

Xin Qi, David J. Foran, Jian Ren, 2018, MICCAI.

3D segmentation of the liver using free-form deformation based on boosting and deformation gradients

Lin Yang, Hong Zhang, Peter J. Yim, 2009, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

EIGEN: Ecologically-Inspired GENetic Approach for Neural Network Structure Searching From Scratch

Ning Xu, Tianbao Yang, David J. Foran, 2018, 2019 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR).

Deformable Models And Their Application In Segmentation Of Imaged Pathology Specimens

Lin Yang, David J. Foran, D. Foran, 2007 .

Factorized Adversarial Networks for Unsupervised Domain Adaptation pdf

Ning Xu, David J. Foran, Jian Ren, 2018, ArXiv.

Parallel Versus Distributed Data Access for Gigapixel-Resolution Histology Images: Challenges and Opportunities

David J. Foran, Esma Yildirim, D. Foran, 2017, IEEE Journal of Biomedical and Health Informatics.

Computer-assisted assessment of the Human Epidermal Growth Factor Receptor 2 immunohistochemical assay in imaged histologic sections using a membrane isolation algorithm and quantitative analysis of positive controls

David J. Foran, Bonnie Hall, Monica Ianosi-Irimie, 2008, BMC Medical Imaging.

A Dynamic Imaging Database for 3-D Morphologic Analysis and Clinical Assessment in Diagnostic Radiology

David J. Foran, Kevin J. DeMarco, John L. Nosher, 2002, AMIA.

A Parallel Point Matching Algorithm for Landmark Based Image Registration Using Multicore Platform

Lin Yang, Hong Zhang, Leiguang Gong, 2009, Euro-Par.

AI in Medical Imaging Informatics: Current Challenges and Future Directions

Sotirios A. Tsaftaris, Alistair A. Young, Tahsin Kurc, 2020, IEEE Journal of Biomedical and Health Informatics.

Dynamic online registration guided collaborative tracking of lung tumor movement in fluoroscopic videos

Casimir A. Kulikowski, Lin Yang, Leiguang Gong, 2011, 2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

Multi-Feature Semi-Supervised Learning for COVID-19 Diagnosis from Chest X-Ray Images

David J. Foran, Ilker Hacihaliloglu, John L. Nosher, 2021, MLMI@MICCAI.

Liver disease classification from ultrasound using multi-scale CNN

David J. Foran, Ilker Hacihaliloglu, John L. Nosher, 2021, International Journal of Computer Assisted Radiology and Surgery.

Chest X-ray image phase features for improved diagnosis of COVID-19 using convolutional neural network

David J. Foran, Ilker Hacihaliloglu, Xiao Qi, 2020, International Journal of Computer Assisted Radiology and Surgery.

High Throughput Landmark Based Image Registration Using Cloud Computing

Lin Yang, Manish Parashar, David J. Foran, 2011 .

High-throughput Image Analysis of Tumor Spheroids: A User-friendly Software Application to Measure the Size of Spheroids Automatically and Accurately

David J. Foran, Wenjin Chen, A. Levine, 2014, Journal of visualized experiments : JoVE.

Microarray-facilitated mechanical characterization of breast tissue pathology samples using contact-mode Atomic Force Microscopy (AFM)

Jaydev P. Desai, David J. Foran, Wenjin Chen, 2010, 2010 3rd IEEE RAS & EMBS International Conference on Biomedical Robotics and Biomechatronics.

Magnetic Resonance Imaging as a Biomarker for Renal Cell Carcinoma

David J. Foran, Eric A. Singer, Mina Labib, 2015, Disease markers.

MICRORNA EXPRESSION PROFILE IN CLEAR-CELL KIDNEY CANCER

Gabriela Alexe, Gyan Bhanot, Anant Madabhushi, 2008 .

A Mechanical Model of Porcine Vascular Tissues-Part I: Determination of Macromolecular Component Arrangement and Volume Fractions

David J. Foran, Frederick H. Silver, D. Foran, 2004 .

GPU Enabled Parallel Touching Cell Segmentation Using Mean Shift Based Seed Detection and Repulsive Level Set

Lin Yang, Fuyong Xing, David J. Foran, 2010 .