Joaquín Tárraga

发表

Acceleration of short and long DNA read mapping without loss of accuracy using suffix array

Ignacio Blanquer, Joaquín Dopazo, Ignacio Medina, 2014, Bioinform..

The role of the environment in Parkinson's disease.

Joaquín Dopazo, Ignacio Medina, Joaquín Tárraga, 1996, Nucleic Acids Res..

Prophet, a web-based tool for class prediction using microarray data

Joaquín Dopazo, Ignacio Medina, Joaquín Tárraga, 2007, Bioinform..

Next station in microarray data analysis: GEPAS

Joaquín Dopazo, Joaquín Tárraga, Javier Herrero, 2006, Nucleic Acids Res..

HPG pore: an efficient and scalable framework for nanopore sequencing data

Joaquín Dopazo, Ignacio Medina, Joaquín Tárraga, 2016, BMC Bioinformatics.

A framework for genomic sequencing on clusters of multicore and manycore processors

Joaquín Dopazo, Enrique S. Quintana-Ortí, Ignacio Medina, 2018, Int. J. High Perform. Comput. Appl..

Concurrent and Accurate RNA Sequencing on Multicore Platforms pdf

Joaquín Dopazo, Enrique S. Quintana-Ortí, Ignacio Medina, 2013, ArXiv.

HGVA: the Human Genome Variation Archive

Joaquín Dopazo, Marta Bleda, Joaquín Tárraga, 2017, Nucleic Acids Res..

ISACGH: a web-based environment for the analysis of Array CGH and gene expression which includes functional profiling

Joaquín Dopazo, Ignacio Medina, Joaquín Tárraga, 2007, Nucleic Acids Res..

Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling

Joaquín Dopazo, Ignacio Medina, Stefan Götz, 2010, Nucleic Acids Res..

Fast inexact mapping using advanced tree exploration on backward search methods

Andrés Tomás, Ignacio Blanquer, Joaquín Dopazo, 2015, BMC Bioinformatics.

VISMapper: ultra-fast exhaustive cartography of viral insertion sites for gene therapy

Joaquín Dopazo, Ignacio Medina, Joaquín Tárraga, 2017, BMC Bioinformatics.

GEPAS, a web-based tool for microarray data analysis and interpretation

Joaquín Dopazo, Ignacio Medina, Stefan Götz, 2008, Nucleic Acids Res..

A new parallel pipeline for DNA methylation analysis of long reads datasets

Joaquín Dopazo, Juan M. Orduña, Joaquín Tárraga, 2017, BMC Bioinformatics.

A parallel and sensitive software tool for methylation analysis on multicore platforms

José Duato, Joaquín Dopazo, Ignacio Medina, 2015, Bioinform..

Babelomics 5.0: functional interpretation for new generations of genomic data

Rosa D. Hernansaiz-Ballesteros, Marta Bleda, Francisco Salavert, 2015, Nucleic Acids Res..

CellBase, a comprehensive collection of RESTful web services for retrieving relevant biological information from heterogeneous sources

Marta Bleda, Francisco Salavert, Joaquín Dopazo, 2012, Nucleic Acids Res..

Phylemon: a suite of web tools for molecular evolution, phylogenetics and phylogenomics

Joaquín Dopazo, Ignacio Medina, Joaquín Tárraga, 2007, Nucleic Acids Res..

Scalable RNA Sequencing on Clusters of Multicore Processors

Joaquín Dopazo, Enrique S. Quintana-Ortí, Ignacio Medina, 2015, TrustCom 2015.

Using GPUs for the Exact Alignment of Short-Read Genetic Sequences by Means of the Burrows-Wheeler Transform

Andrés Tomás, Ignacio Blanquer, Joaquín Dopazo, 2012, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Scalable RNA Sequencing on Clusters of Multicore Processors

Enrique S. Quintana-Ortí, Joaquín Dopazo, Ignacio Medina, 2015, 2015 IEEE Trustcom/BigDataSE/ISPA.

Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing

Rubén Sánchez, Joaquín Dopazo, Ignacio Medina, 2011, Nucleic Acids Res..

Gene set-based analysis of polymorphisms: finding pathways or biological processes associated to traits in genome-wide association studies

Joaquín Dopazo, Ignacio Medina, Joaquín Tárraga, 2009, Nucleic Acids Res..

A dynamic pipeline for RNA sequencing on multicore processors

Joaquín Dopazo, Enrique S. Quintana-Ortí, Sergio Barrachina, 2013, EuroMPI.

BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments

Joaquín Dopazo, Christian Blaschke, Joaquín Tárraga, 2006, Nucleic Acids Res..

Babelomics: advanced functional profiling of transcriptomics, proteomics and genomics experiments

Joaquín Dopazo, Ignacio Medina, Stefan Götz, 2008, Nucleic Acids Res..

Functional profiling and gene expression analysis of chromosomal copy number alterations

Joaquín Dopazo, Joaquín Tárraga, Fátima Al-Shahrour, 2007, Bioinformation.