Paul J. Kersey

发表

UTRdb and UTRsite: a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs

Graziano Pesole, Flavio Licciulli, Flavio Mignone, 2004, Nucleic Acids Res..

Programmatic Interfaces to Plant Genomic Data

Paul J. Kersey, 2015 .

COPO: a metadata platform for brokering FAIR data in the life sciences

Paul J. Kersey, Elizabeth Arnaud, Medha Devare, 2019, bioRxiv.

Gramene 2013: comparative plant genomics resources

Dan M. Bolser, Lincoln Stein, Guanming Wu, 2013, Nucleic Acids Res..

Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species

Robert D. Finn, Zicheng Liu, Alessandro Vullo, 2017, Nucleic Acids Res..

COPO - Linked Open Infrastructure for Plant Data

David Johnson, Paul J. Kersey, Susanna-Assunta Sansone, 2015, SWAT4LS.

WormBase 2017: molting into a new stage

Kimberly Van Auken, Juancarlos Chan, Hans-Michael Müller, 2017, Nucleic Acids Res..

Gramene 2016: comparative plant genomics and pathway resources

Lincoln Stein, Nuno A. Fonseca, Robert Petryszak, 2015, Nucleic Acids Res..

PhytoPath: an integrative resource for plant pathogen genomics

Uma Maheswari, Paul J. Kersey, Eugene Kulesha, 2015, Nucleic Acids Res..

Automated annotation of microbial proteomes in SWISS-PROT

Anne-Lise Veuthey, Elisabeth Coudert, Amos Bairoch, 2003, Comput. Biol. Chem..

Integrating Genomic and Proteomic Data: The Integr8 Project

Rolf Apweiler, Paul J. Kersey, Manuela Pruess, 2004, J. Integr. Bioinform..

PomBase: a comprehensive online resource for fission yeast

Jürg Bähler, Midori A. Harris, Paul J. Kersey, 2011, Nucleic Acids Res..

PomBase 2015: updates to the fission yeast database

Jürg Bähler, Midori A. Harris, Paul J. Kersey, 2014, Nucleic Acids Res..

Collaborative Annotation Redefines Gene Sets for Crucial Phytopathogens

Paul J. Kersey, Andrew D. Yates, Helder Pedro, 2019, Front. Microbiol..

Technical comment to "Database verification studies of SWISS-PROT and GenBank" by Karp et al

Rolf Apweiler, Amos Bairoch, Paul J. Kersey, 2001, Bioinform..

Data standards for plant phenotyping: MIAPPE and its implementations [W785]

Pascal Neveu, Richard Finkers, Frederik Coppens, 2018 .

Gramene 2018: unifying comparative genomics and pathway resources for plant research

Bo Wang, Lincoln Stein, Nuno A. Fonseca, 2017, Nucleic Acids Res..

VARSPLIC: alternatively-spliced protein sequences derived from SWISS-PROT and TrEMBL

Rolf Apweiler, Henning Hermjakob, Paul J. Kersey, 2000, Bioinform..

WormBase 2014: new views of curated biology

Kimberly Van Auken, Juancarlos Chan, Hans-Michael Müller, 2013, Nucleic Acids Res..

Ensembl Genomes 2013: scaling up access to genome-wide data

Dan M. Bolser, Paul Davis, James E. Allen, 2013, Nucleic Acids Res..

Proteome Analysis: Application of InterPro and CluSTr for the Functional Classification of Proteins in Whole Genomes

Rolf Apweiler, Nicola J. Mulder, Evgeny M. Zdobnov, 2000, German Conference on Bioinformatics.

Ensembl Genomes: Extending Ensembl across the taxonomic space

Gautier Koscielny, Uma Maheswari, Paul J. Kersey, 2009, Nucleic Acids Res..

WormBase 2012: more genomes, more data, new website

Kimberly Van Auken, Juancarlos Chan, Hans-Michael Müller, 2011, Nucleic Acids Res..

Ensembl BioMarts: a hub for data retrieval across taxonomic space

Syed Haider, Paul J. Kersey, Andreas Kähäri, 2011, Database J. Biol. Databases Curation.

Integr8 and Genome Reviews: integrated views of complete genomes and proteomes

Ingmar Reuter, Robert Petryszak, Rolf Apweiler, 2004, Nucleic Acids Res..

Interactive InterPro-based comparisons of proteins in whole genomes

Rolf Apweiler, Nicola J. Mulder, Evgeny M. Zdobnov, 2002, Bioinform..

The Integr8 project - a resource for genomic and proteomic data

Rolf Apweiler, Paul J. Kersey, Manuela Pruess, 2004, Silico Biol..

The Proteome Analysis database: a tool for the in silico analysis of whole proteomes

Rolf Apweiler, Nicola J. Mulder, Paul J. Kersey, 2003, Nucleic Acids Res..

WormBase 2016: expanding to enable helminth genomic research

Kimberly Van Auken, Juancarlos Chan, Hans-Michael Müller, 2015, Nucleic Acids Res..

Gramene database in 2010: updates and extensions

Edward S. Buckler, Liya Ren, Paul J. Kersey, 2010, Nucleic Acids Res..

Proteome Analysis Database: online application of InterPro and CluSTr for the functional classification of proteins in whole genomes

Rolf Apweiler, Nicola J. Mulder, Evgeny M. Zdobnov, 2001, Nucleic Acids Res..

Ensembl Genomes 2016: more genomes, more complexity

Dan M. Bolser, James E. Allen, Paul J. Kersey, 2015, Nucleic Acids Res..

Ensembl Genomes: an integrative resource for genome-scale data from non-vertebrate species

Gautier Koscielny, Uma Maheswari, Paul J. Kersey, 2011, Nucleic Acids Res..

Applications of InterPro in Protein Annotation and Genome Analysis

Rolf Apweiler, Nicola J. Mulder, Paul J. Kersey, 2002, Briefings Bioinform..

Data management challenges for artificial intelligence in plant and agricultural research

Sotirios A. Tsaftaris, Sabina Leonelli, Carole Goble, 2021, F1000Research.

An International Bioinformatics Infrastructure to Underpin the Arabidopsis Community

Christopher J. Rawlings, Paul N. Schofield, Andrew J. Millar, 2010, Plant Cell.

Abbreviations: ModENCODE, Model Organism Database ENCyclopedia Of DNA Elements; EST, Expressed Sequence Tag; cDNA, complementary DNA; RNASeq, RNA sequencing by 2nd generation technologies; C., Caenorhabditis; INSDC, International Nucleotide Sequence Database Collaboration

Paul W. Sternberg, Paul J. Kersey, Richard Durbin, 2012 .