Xuhui Huang

发表

Application of Markov State Models to simulate long timescale dynamics of biological macromolecules.

Lin-Tai Da, Fu Kit Sheong, Daniel-Adriano Silva, 2014, Advances in experimental medicine and biology.

Correntropy induced metric based graph regularized non-negative matrix factorization

Zhigang Luo, Dacheng Tao, Naiyang Guan, 2014, Proceedings 2014 IEEE International Conference on Security, Pattern Analysis, and Cybernetics (SPAC).

Attention Focused Spatial Pyramid Pooling for Boxless Action Recognition in Still Images

Zhigang Luo, Xiang Zhang, Xuhui Huang, 2017, ICANN.

Non-negative Low-Rank and Group-Sparse Matrix Factorization

Zhigang Luo, Dacheng Tao, Xiang Zhang, 2015, MMM.

Graph-Laplacian Correlated Low-Rank Representation for Subspace Clustering

Long Lan, Xiang Zhang, Zhigang Lu, 2018, 2018 25th IEEE International Conference on Image Processing (ICIP).

GNMF Revisited: Joint Robust k-NN Graph and Reconstruction-Based Graph Regularization for Image Clustering

Zhigang Luo, Xiang Zhang, Chenxu Wang, 2017, ICANN.

Quantitatively Characterizing the Ligand Binding Mechanisms of Choline Binding Protein Using Markov State Model Analysis

Shuo Gu, Daniel-Adriano Silva, Xuhui Huang, 2014, PLoS Comput. Biol..

Stacked Marginal Time Warping for Temporal Alignment

Long Lan, Zhigang Luo, Xiang Zhang, 2018, Neural Processing Letters.

Vehicle state estimation for anti-lock control with nonlinear observer

Joachim Rudolph, Xuhui Huang, Fei Sun, 2015 .

Multiscale modeling of macromolecular biosystems

Ruhong Zhou, Xuhui Huang, Julie Bernauer, 2012, Briefings Bioinform..

Symmetric Non-negative Matrix Factorization Based Link Partition Method for Overlapping Community Detection

Zhigang Luo, Xiang Zhang, Naiyang Guan, 2015, 2015 IEEE International Conference on Systems, Man, and Cybernetics.

Distributed graph regularized non-negative matrix factorization with greedy coordinate descent

Zhigang Luo, Yuhua Tang, Naiyang Guan, 2016, 2016 IEEE International Conference on Systems, Man, and Cybernetics (SMC).

Labelwalking nonnegative matrix factorization

Long Lan, Zhigang Luo, Xiang Zhang, 2015, 2015 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).

Correntropy supervised non-negative matrix factorization

Zhigang Luo, Dacheng Tao, Naiyang Guan, 2015, 2015 International Joint Conference on Neural Networks (IJCNN).

Constraint-Relaxation Approach for Nonnegative Matrix Factorization: A Case Study

Zhigang Luo, Naiyang Guan, Xuhui Huang, 2015, 2015 IEEE International Conference on Systems, Man, and Cybernetics.

TAPS: A traveling-salesman based automated path searching method for functional conformational changes of biological macromolecules.

Fu Kit Sheong, Xuhui Huang, Song Liu, 2019, The Journal of chemical physics.

Margin-Embedding Canonical Correlation Analysis with Feature Selection for Person Re-Identification

Long Lan, Zhigang Luo, Xiang Zhang, 2018, 2018 25th IEEE International Conference on Image Processing (ICIP).

Semi-supervised Non-negative Local Coordinate Factorization

Zhigang Luo, Xiang Zhang, Naiyang Guan, 2015, ICONIP.

MULTI-RESOLUTION MODELING OF BIOLOGICAL MACROMOLECULES - Session Introduction.

Ruhong Zhou, Xuhui Huang, Julie Bernauer, 2010, PSB 2010.

Clustering algorithms to analyze molecular dynamics simulation trajectories for complex chemical and biological systems

Wei Wang, Xuhui Huang, Jun-hui Peng, 2018, Chinese Journal of Chemical Physics.

Constructing Multi-Resolution Markov State Models (MSMs) to Elucidate RNA Hairpin Folding Mechanisms

Leonidas J. Guibas, Yuan Yao, Vijay S. Pande, 2010, Pacific Symposium on Biocomputing.

Two-Dimensional Euler PCA for Face Recognition

Zhigang Luo, Dacheng Tao, Xiang Zhang, 2015, MMM.

Discrete Graph Hashing via Affine Transformation

Long Lan, Zhigang Luo, Xiang Zhang, 2018, 2018 IEEE International Conference on Multimedia and Expo (ICME).

Scheduling of balancing WSC for minimum IP testing time

Jiao Li, Xuhui Huang, Jinyi Zhang, 2009 .

A Role for Both Conformational Selection and Induced Fit in Ligand Binding by the LAO Protein

Daniel-Adriano Silva, Xuhui Huang, Gregory R. Bowman, 2011, PLoS Comput. Biol..

Markov State Models Reveal a Two-Step Mechanism of miRNA Loading into the Human Argonaute Protein: Selective Binding followed by Structural Re-arrangement

Xin Gao, Fu Kit Sheong, Xuhui Huang, 2015, PLoS Comput. Biol..

Ranking-Embedded Transfer Canonical Correlation Analysis for Person Re-Identification

Xiang Zhang, Long Lan, Zhigang Luo, 2018, 2018 International Joint Conference on Neural Networks (IJCNN).

Navigation Algorithm Based on the Boundary Line of Tillage Soil Combined with Guided Filtering and Improved Anti-Noise Morphology

Ling Wang, Hui Luo, Yiming Deng, 2019, Sensors.

DATA-DRIVEN TIGHT FRAME FOR CRYO-EM IMAGE DENOISING AND CONFORMATIONAL CLASSIFICATION

Yang Wang, Yuan Yao, Jian-Feng Cai, 2018, 2018 IEEE Global Conference on Signal and Information Processing (GlobalSIP).

Single image defogging with single and multiple hybrid scattering model

Zhigang Luo, Xiang Zhang, Naiyang Guan, 2014, Proceedings 2014 IEEE International Conference on Security, Pattern Analysis, and Cybernetics (SPAC).

Underground miners localization system based on ZigBee and WebGIS

Wei Zhu, Xuhui Huang, Dongxin Lu, 2010, 2010 18th International Conference on Geoinformatics.

Overlapping community detection via link partition of asymmetric weighted graph

Zhigang Luo, Naiyang Guan, Xuhui Huang, 2014, Proceedings 2014 IEEE International Conference on Security, Pattern Analysis, and Cybernetics (SPAC).

Defects Tracking via NDE Based Transfer Learning

Lalita Udpa, Yiming Deng, Xuhui Huang, 2020, 2020 IEEE International Conference on Prognostics and Health Management (ICPHM).

Massively parallel de novo protein design for targeted therapeutics

Lu Zhang, Xuhui Huang, David Baker, 2017, Nature.

A fast parallel clustering algorithm for molecular simulation trajectories

Fu Kit Sheong, Xuhui Huang, Yutong Zhao, 2013, J. Comput. Chem..

Area-time associated test cost model for SoC and lower bound of test time

Xuhui Huang, Jinyi Zhang, Wanlin Cai, 2011 .

Semi-supervised Non-negative Patch Alignment Framework

Long Lan, Zhigang Luo, Xiang Zhang, 2012, 2012 11th International Conference on Machine Learning and Applications.

An efficient Bayesian kinetic lumping algorithm to identify metastable conformational states via Gibbs sampling.

Fu Kit Sheong, Xuhui Huang, Wei Wang, 2018, The Journal of chemical physics.

Enhancing temporal alignment with autoencoder regularization

Zhigang Luo, Xiang Zhang, Yuanyuan Wang, 2016, 2016 International Joint Conference on Neural Networks (IJCNN).

MULTI-SCALE MODELLING OF BIOSYSTEMS: FROM MOLECULAR TO MESOCALE - Session Introduction.

Ruhong Zhou, Xuhui Huang, Julie Bernauer, 2011, PSB 2011.

Unsupervised domain adaptation with joint supervised sparse coding and discriminative regularization term

Zhigang Luo, Lin Zhu, Xiang Zhang, 2017, 2017 IEEE International Conference on Image Processing (ICIP).

Hierarchical Nyström methods for constructing Markov state models for conformational dynamics.

Yuan Yao, Daniel-Adriano Silva, Xuhui Huang, 2013, The Journal of chemical physics.

Structural Model of RNA Polymerase II Elongation Complex with Complete Transcription Bubble Reveals NTP Entry Routes

Dong Wang, Lu Zhang, Daniel-Adriano Silva, 2015, PLoS Comput. Biol..

Boxless Action Recognition in Still Images via Recurrent Visual Attention

Zhigang Luo, Xiang Zhang, Xuhui Huang, 2017, ICONIP.

Quantitative comparison of alternative methods for coarse-graining biological networks.

Xuhui Huang, Gregory R Bowman, Luming Meng, 2013, The Journal of chemical physics.

Translation non-negative matrix factorization with fast optimization

Zhigang Luo, Naiyang Guan, Yuanyuan Wang, 2014, 2014 IEEE International Conference on Systems, Man, and Cybernetics (SMC).

Force field development for cofactors in the photosystem II

Lu Zhang, Daniel-Adriano Silva, Xuhui Huang, 2012, J. Comput. Chem..

Long-period rhythmic synchronous firing in a scale-free network

Si Wu, Weifeng Gu, Xuhui Huang, 2013, Proceedings of the National Academy of Sciences.

Nonnegative Constrained Graph Based Canonical Correlation Analysis for Multi-view Feature Learning

Long Lan, Zhigang Luo, Xiang Zhang, 2018, Neural Processing Letters.

NDE Based Cost-Effective Detection of Obtrusive and Coincident Defects in Pipelines Under Uncertainties

Lalita Udpa, Xuhui Huang, Subrata Mukherjee, 2019, 2019 Prognostics and System Health Management Conference (PHM-Paris).

Multi-granularity Hierarchical Attention Siamese Network for Visual Tracking

Xing Chen, Xiang Zhang, Long Lan, 2018, 2018 International Joint Conference on Neural Networks (IJCNN).

Using generalized ensemble simulations and Markov state models to identify conformational states.

Xuhui Huang, Vijay S Pande, Gregory R Bowman, 2009, Methods.

Adaptive partitioning by local density‐peaks: An efficient density‐based clustering algorithm for analyzing molecular dynamics trajectories

Song Liu, Fu Kit Sheong, Xuhui Huang, 2017, J. Comput. Chem..

A Biologically Plausible Supervised Learning Method for Spiking Neural Networks Using the Symmetric STDP Rule

Bo Xu, Meng Dong, Xuhui Huang, 2018, Neural Networks.

Box-constrained Discriminant Projective Non-negative Matrix Factorization through Augmented Lagrangian Multiplier Method

Xiang Zhang, Zhigang Luo, Xuhui Huang, 2018, 2018 International Joint Conference on Neural Networks (IJCNN).

THEORETICAL INVESTIGATIONS ON ELUCIDATING FUNDAMENTAL MECHANISMS OF CATALYSIS AND DYNAMICS INVOLVED IN TRANSCRIPTION BY RNA POLYMERASE

Xuhui Huang, Ying Wang, Lin-Tai Da, 2013 .

Graph Based Semi-supervised Non-negative Matrix Factorization for Document Clustering

Long Lan, Zhigang Luo, Xiang Zhang, 2012, 2012 11th International Conference on Machine Learning and Applications.

Cross-Layer Convolutional Siamese Network for Visual Tracking

Long Lan, Zhigang Luo, Xiang Zhang, 2018, ICONIP.

Elucidation of the conformational dynamics of multi-body systems by construction of Markov state models.

Fu Kit Sheong, Xuhui Huang, Lizhe Zhu, 2016, Physical chemistry chemical physics : PCCP.

Multiscale modeling of macromolecular

Ruhong Zhou, Xuhui Huang, Julie Bernauer, 2012 .

Path lumping: An efficient algorithm to identify metastable path channels for conformational dynamics of multi-body systems.

Fu Kit Sheong, Xuhui Huang, Lizhe Zhu, 2017, The Journal of chemical physics.

Towards robust ego-centric hand gesture analysis for robot control

Zhigang Luo, Xuhui Huang, Naiyang Guan, 2016, 2016 IEEE International Conference on Signal and Image Processing (ICSIP).

A Two-State Model for the Dynamics of the Pyrophosphate Ion Release in Bacterial RNA Polymerase

Dong Wang, Xuhui Huang, Fátima Pardo Avila, 2013, PLoS Comput. Biol..

Low-Rank Matrix Recovery via Continuation-Based Approximate Low-Rank Minimization

Long Lan, Zhigang Luo, Xiang Zhang, 2018, PRICAI.

Three-Dimensional Numerical Calculation Model for Static Behavior Simulation of Cross-Laminated Timber Plates under Thermal Environment

Xuhui Huang, Wenliang Hu, Wei Hou, 2021 .

A Note on Learning Rare Events in Molecular Dynamics using LSTM and Transformer pdf

Xuhui Huang, Siqin Cao, Yuan Yao, 2021, ArXiv.

ECKPN: Explicit Class Knowledge Propagation Network for Transductive Few-shot Learning

Changsheng Xu, Xiaoshan Yang, Xuhui Huang, 2021, 2021 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR).

The predicted structure of the headpiece of the Huntingtin protein and its implications on Huntingtin aggregation.

Xuhui Huang, Vijay S Pande, Judith Frydman, 2009, Journal of molecular biology.

Replica exchange with solute tempering: efficiency in large scale systems.

Ruhong Zhou, Xuhui Huang, Richard A Friesner, 2007, The journal of physical chemistry. B.

Observation of a dewetting transition in the collapse of the melittin tetramer

Ruhong Zhou, Xuhui Huang, Pu Liu, 2005, Nature.

Dramatic Differences in Aggregation-Induced Emission and Supramolecular Polymerizability of Tetraphenylethene-Based Stereoisomers.

Ben Zhong Tang, Xuhui Huang, Xiaoyan Zheng, 2017, Journal of the American Chemical Society.

Simulating the T-jump triggered unfolding dynamics of Trpzip 2 peptide and its time resolved IR and 2 DIR signals using Markov State Model Approach

Xuhui Huang, Daniel-Adriano Silva, Wei Zhuang, 2011 .

Hydrophobic aided replica exchange: an efficient algorithm for protein folding in explicit solvent.

Ruhong Zhou, Xuhui Huang, B J Berne, 2006, The journal of physical chemistry. B.

Weak Higher-Order Interactions in Macroscopic Functional Networks of the Resting Brain

Tianzi Jiang, Kaibin Xu, Xuhui Huang, 2017, The Journal of Neuroscience.

A Fast Geometric Clustering Method on Conformation Space of Biomolecules

Leonidas J. Guibas, Yuan Yao, Gunnar Carlsson, 2009 .

Structural Insight into RNA Hairpin Folding Intermediates

Leonidas J. Guibas, Yuan Yao, Vijay S. Pande, 2008, Journal of the American Chemical Society.

A high efficient one-end-pumped TEM00 laser with optimal pump mode

Dong Wang, Xuhui Huang, Qiang Liu, 2008 .

Bridging the Gap Between Optical Spectroscopic Experiments and Computer Simulations for Fast Protein Folding Dynamics

Xuhui Huang, Gregory R. Bowman, Daniel-Adriano Silva, 2012 .

Hydrophobic Collapse in Multidomain Protein Folding

Ruhong Zhou, Xuhui Huang, Bruce J. Berne, 2004, Science.

Unraveling the aggregation effect on amorphous phase AIE luminogens: a computational study.

Xuhui Huang, Zhigang Shuai, Xiaoyan Zheng, 2016, Nanoscale.

DNA-Encoded Dynamic Chemical Library and Its Applications in Ligand Discovery.

Xuhui Huang, Xin Li, Qingrong Li, 2018, Journal of the American Chemical Society.

Adaptive Seeding: A New Method for Simulating Biologically Relevant Timescales

Vijay S. Pande, Xuhui Huang, Gregory R. Bowman, 2009 .