Rory M. Donovan

Unbiased Rare Event Sampling in Spatial Stochastic Systems Biology Models Using a Weighted Ensemble of Trajectories

Robert F. Murphy, Daniel M. Zuckerman, James R. Faeder, 2016, PLoS Comput. Biol..

Learning mixed graphical models with separate sparsity parameters and stability-based model selection

Andrew J. Sedgewick, Panayiotis V. Benos, Rory M. Donovan, 2016, BMC Bioinformatics.

Efficient stochastic simulation of chemical kinetics networks using a weighted ensemble of trajectories.

James R Faeder, Daniel M Zuckerman, Rory M Donovan, 2013, The Journal of chemical physics.

BDQC: a general-purpose analytics tool for domain-blind validation of Big Data

Arthur W. Toga, Anushya Muruganujan, Carl Kesselman, 2018, bioRxiv.