Emidio Capriotti

发表

Integrating molecular networks with genetic variant interpretation for precision medicine

Emidio Capriotti, Kivilcim Ozturk, Hannah Carter, 2018, Wiley interdisciplinary reviews. Systems biology and medicine.

Quantifying the relationship between sequence and three-dimensional structure conservation in RNA

Marc A. Martí-Renom, Emidio Capriotti, 2009, BMC Bioinformatics.

Russ B. Altman, Emidio Capriotti, Roxana Daneshjou, 2011, Bioinform..

Faculty Opinions recommendation of Bayesian approach to transforming public gene expression repositories into disease diagnosis databases.

Russ B. Altman, Emidio Capriotti, R. Altman, 2010 .

K-Fold: a tool for the prediction of the protein folding kinetic order and rate

Emidio Capriotti, Rita Casadio, E. Capriotti, 2007, Bioinform..

ContrastRank: a new method for ranking putative cancer driver genes and classification of tumor samples

Emidio Capriotti, Rui Tian, Malay Kumar Basu, 2014, Bioinform..

Assessment of protein structure predictions

Emidio Capriotti, Marc A. Marti-Renom, E. Capriotti, 2008 .

The WWWH of remote homolog detection: The state of the art

Piero Fariselli, Emidio Capriotti, Rita Casadio, 2006, Briefings Bioinform..

A machine learning approach to predict cancer-related mutations

Emidio Capriotti, Rita Casadio, Remo Calabrese, 2008 .

The pros and cons of predicting protein contact maps.

Piero Fariselli, Emidio Capriotti, Pier Luigi Martelli, 2008, Methods in molecular biology.

All-atom knowledge-based potential for RNA structure prediction and assessment

Marc A. Martí-Renom, Emidio Capriotti, Tomás Norambuena, 2011, Bioinform..

WALTZ-DB: a benchmark database of amyloidogenic hexapeptides

Joost J. J. van Durme, Joost Schymkowitz, Frederic Rousseau, 2015, Bioinform..

Bioinformatics challenges for personalized medicine

Russ B. Altman, Emidio Capriotti, Roxana Daneshjou, 2011, Bioinform..

Cover Picture

Emidio Capriotti, Rita Casadio, Fabio Grandi, 2018, Math. Log. Q..

A Shannon entropy‐based filter detects high‐ quality profile–profile alignments in searches for remote homologues

Piero Fariselli, Emidio Capriotti, Rita Casadio, 2004, Proteins.

Editor's Choice: SNP-SIG 2013: the state of the art of genomic variant interpretation

Emidio Capriotti, Yana Bromberg, 2015, Bioinform..

Improving the prediction of disease-related variants using protein three-dimensional structure

Russ B. Altman, Emidio Capriotti, R. Altman, 2011, BMC Bioinformatics.

DDGun: an untrained method for the prediction of protein stability changes upon single and multiple point variations

Piero Fariselli, Emidio Capriotti, Nir Ben-Tal, 2019, BMC Bioinformatics.

Computational Methods for RNA Structure Prediction and Analysis

Emidio Capriotti, Marc A. Marti-Renom, David Dufour, 2014 .

Machine learning and the prediction of protein structure: the state of the art

Piero Fariselli, Emidio Capriotti, Pier Luigi Martelli, 2006 .

SARA-Coffee web server, a tool for the computation of RNA sequence and structure multiple alignments

Emidio Capriotti, Pablo Prieto, Cédric Notredame, 2014, Nucleic Acids Res..

Bioinformatics for personal genome interpretation

Emidio Capriotti, Maricel G. Kann, Yana Bromberg, 2012, Briefings Bioinform..

I-Mutant: predicting protein stability upon mutation

Piero Fariselli, Emidio Capriotti, Rita Casadio, 2004, ISMB 2004.

Limitations and challenges in protein stability prediction upon genome variations: towards future applications in precision medicine

Giovanni Birolo, Piero Fariselli, Emidio Capriotti, 2020, Computational and structural biotechnology journal.

A neural-network-based method for predicting protein stability changes upon single point mutations

Piero Fariselli, Emidio Capriotti, Rita Casadio, 2004, ISMB/ECCB.

Predicting protein stability changes from sequences using support vector machines

Piero Fariselli, Emidio Capriotti, Rita Casadio, 2005, ECCB/JBI.

PhD-SNPg: a webserver and lightweight tool for scoring single nucleotide variants

Piero Fariselli, Emidio Capriotti, E. Capriotti, 2017, Nucleic Acids Res..

Predicting gene expression level in E. coli from mRNA sequence information

Emidio Capriotti, Linlin Zhao, Markus Kollmann, 2016, bioRxiv.

A three-state prediction of single point mutations on protein stability changes

Piero Fariselli, Emidio Capriotti, Rita Casadio, 2007, BMC Bioinformatics.

Comparative modeling and structure prediction: application to drug discovery

Emidio Capriotti, 2013 .

RNA structure alignment by a unit-vector approach

Marc A. Martí-Renom, Emidio Capriotti, E. Capriotti, 2008, ECCB.

Using tertiary structure for the computation of highly accurate multiple RNA alignments with the SARA-Coffee package

Marc A. Martí-Renom, Emidio Capriotti, Cédric Notredame, 2013, Bioinform..

A minimal model of three-state folding dynamics of helical proteins.

Emidio Capriotti, Mario Compiani, Alberto Stizza, 2005, The journal of physical chemistry. B.

Predicting protein stability changes from sequence with Support Vector Machines

Piero Fariselli, Emidio Capriotti, Rita Casadio, 2005 .

Computational and theoretical methods for protein folding.

Emidio Capriotti, Mario Compiani, E. Capriotti, 2013, Biochemistry.

Bioinformatics Original Paper Predicting the Insurgence of Human Genetic Diseases Associated to Single Point Protein Mutations with Support Vector Machines and Evolutionary Information

Emidio Capriotti, Rita Casadio, Remo Calabrese, 2022 .

SARA: a server for function annotation of RNA structures

Marc A. Martí-Renom, Emidio Capriotti, E. Capriotti, 2009, Nucleic Acids Res..

I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure

Piero Fariselli, Emidio Capriotti, Rita Casadio, 2005, Nucleic Acids Res..

PhD-SNP, a web server for the prediction of human genetic diseases associated to single point protein mutation.

Emidio Capriotti, Rita Casadio, Remo Calabrese, 2006 .

Bioinformatics challenges for personalized medicine

Russ B. Altman, Emidio Capriotti, Roxana Daneshjou, 2011, Bioinform..

WebRASP: a server for computing energy scores to assess the accuracy and stability of RNA 3D structures

Francisco Melo, Emidio Capriotti, Tomás Norambuena, 2013, Bioinform..

Calibrating variant-scoring methods for clinical decision making

Piero Fariselli, Emidio Capriotti, Silvia Benevenuta, 2020, Bioinform..

Performance of in silico tools for the evaluation of p16INK4a (CDKN2A) variants in CAGI

Yuedong Yang, Olivier Lichtarge, Giovanni Minervini, 2017, Human mutation.

Assessing the performance of in silico methods for predicting the pathogenicity of variants in the gene CHEK2, among Hispanic females with breast cancer

Olivier Lichtarge, Predrag Radivojac, Emidio Capriotti, 2019, Human mutation.

Blind prediction of deleterious amino acid variations with SNPs&GO

Piero Fariselli, Emidio Capriotti, Pier Luigi Martelli, 2017, Human mutation.

Assessing computational predictions of the phenotypic effect of cystathionine‐beta‐synthase variants

Silvio C. E. Tosatto, Predrag Radivojac, Mauno Vihinen, 2019, Human mutation.

The evaluation of protein folding rate constant is improved by predicting the folding kinetic order with a SVM-based method

Emidio Capriotti, Rita Casadio, 2006 .

Bioinformatics and variability in drug response: a protein structural perspective

Emidio Capriotti, Tianyun Liu, Grace W. Tang, 2012, Journal of The Royal Society Interface.

Computational RNA Structure Prediction

Emidio Capriotti, Marc A. Marti-Renom, E. Capriotti, 2008 .

Performance of computational methods for the evaluation of pericentriolar material 1 missense variants in CAGI‐5

Olivier Lichtarge, Emidio Capriotti, Kivilcim Ozturk, 2019, Human mutation.