Daniel MacLean

发表

Using 2k + 2 bubble searches to find single nucleotide polymorphisms in k-mer graphs

Reda Younsi, Daniel MacLean, R. Younsi, 2014, Bioinformatics.

PhosPhAt: the Arabidopsis thaliana phosphorylation site database. An update

Robert Schmidt, Daniel MacLean, Alexandra Jones, 2009, Nucleic Acids Res..

Identification of Patterns via Region-Growing Parallel SOM Neural Network

Iren Valova, Daniel MacLean, Derek Beaton, 2008, 2008 Seventh International Conference on Machine Learning and Applications.

Fractal initialization for high-quality mapping with self-organizing maps

Iren Valova, Daniel MacLean, Derek Beaton, 2010, Neural Computing and Applications.

PhosCalc: A tool for evaluating the sites of peptide phosphorylation from Mass Spectrometer data

Daniel MacLean, Michael A Burrell, David J Studholme, 2008, BMC Research Notes.

Parasom: An Efficient Self-Organizing Map for Parallel Multidimensional Input Processing and Clustering

Daniel MacLean, Derek Beaton, Iren Valova, 2009 .

TurSOM: A paradigm bridging Turing's unorganized machines and self-organizing maps demonstrating dual self-organization

Iren Valova, Daniel MacLean, Derek Beaton, 2011, Neurocomputing.

bio-samtools 2: a package for analysis and visualization of sequence and alignment data with SAMtools in Ruby

Daniel MacLean, Graham J. Etherington, Ricardo Ramirez-Gonzalez, 2015, Bioinform..

The use of TurSOM for color image segmentation

Daniel MacLean, Derek Beaton, Iren Valova, 2009, 2009 IEEE International Conference on Systems, Man and Cybernetics.

SVGenes: a library for rendering genomic features in scalable vector graphic format

Daniel MacLean, Graham J. Etherington, D. MacLean, 2013, Bioinform..

Rapid fine mapping of causative mutations from sets of unordered, contig-sized fragments of genome sequence

Daniel MacLean, Ghanasyam Rallapalli, Pilar Corredor-Moreno, 2019, BMC Bioinformatics.

SOMs for Machine Learning

Daniel MacLean, Derek Beaton, Iren Valova, 2010 .

Gee Fu: a sequence version and web-services database tool for genomic assembly, genome feature and NGS data

Daniel MacLean, Mario Caccamo, Ricardo Ramirez-Gonzalez, 2011, Bioinform..

Parallel Growing SOM Monitored by Genetic Algorithm

Iren Valova, Daniel MacLean, I. Valova, 2007, 2007 International Joint Conference on Neural Networks.

TurSOM: A Turing inspired Self-Organizing Map

Iren Valova, Daniel MacLean, Derek Beaton, 2009, 2009 International Joint Conference on Neural Networks.

A toolkit for analysing large-scale plant small RNA datasets

Vincent Moulton, Daniel MacLean, Simon Moxon, 2008, Bioinform..

Growing mechanisms and cluster identification with TurSOM

Iren Valova, Daniel MacLean, Derek Beaton, 2009, 2009 International Joint Conference on Neural Networks.

CQoCO: A measure for comparative quality of coverage and organization for self-organizing maps

Iren Valova, Daniel MacLean, Derek Beaton, 2010, Neurocomputing.

Finding sRNA generative locales from high-throughput sequencing data with NiBLS

Vincent Moulton, Daniel MacLean, David J. Studholme, 2010, BMC Bioinformatics.

Role of Initialization in Som Networks - Study of Self-Similar Curve Topologies

Daniel MacLean, Derek Beaton, Iren Valova, 2008 .

The GOBLET training portal: a global repository of bioinformatics training materials, courses and trainers

Celia W. G. van Gelder, Mick Watson, Rafael C. Jimenez, 2015, Bioinform..

Bio-samtools: Ruby bindings for SAMtools, a library for accessing BAM files containing high-throughput sequence alignments

Daniel MacLean, Raoul Jean Pierre Bonnal, Mario Caccamo, 2012, Source Code for Biology and Medicine.

A Parallel Implementation of a Growing SOM Promoting Independent Neural Networks over Distributed Input Space

Iren Valova, John Hammond, Daniel MacLean, 2006, The 2006 IEEE International Joint Conference on Neural Network Proceedings.

Big data in small places

Daniel MacLean, Sophien Kamoun, 2012, Nature Biotechnology.

Biogem: an effective tool-based approach for scaling up open source software development in bioinformatics

Daniel MacLean, Pjotr Prins, Rutger A. Vos, 2012, Bioinform..

NIPSOM: Parallel Architecture and Implementation of a Growing SOM

Iren Valova, John Hammond, Daniel MacLean, 2010, Computer/law journal.