Malbert R. C. Rogers

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Corrigendum: mlplasmids: a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species

Sergio Arredondo-Alonso, Malbert R. C. Rogers, Johanna C. Braat, 2019, Microbial genomics.

gplas: a comprehensive tool for plasmid analysis using short-read graphs

Sergio Arredondo-Alonso, Malbert R. C. Rogers, Anita C. Schürch, 2019, bioRxiv.

mlplasmids: a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species

Sergio Arredondo-Alonso, Malbert R. C. Rogers, Johanna C. Braat, 2018, bioRxiv.

Behçet's Disease Under Microbiotic Surveillance? A Combined Analysis of Two Cohorts of Behçet's Disease Patients

Malbert R. C. Rogers, C. Consolandi, M. Severgnini, 2020, Frontiers in Immunology.

Gut Colonization by ESBL-Producing Escherichia coli in Dogs Is Associated with a Distinct Microbiome and Resistome Composition

Malbert R. C. Rogers, Aldert L. Zomer, A. Zomer, 2023, Microbiology spectrum.

Impact of long-term dietary habits on the human gut resistome in the Dutch population

Malbert R. C. Rogers, E. Franz, R. V. D. van der Plaats, 2022, Scientific Reports.

Roux-Y Gastric Bypass and Sleeve Gastrectomy directly change gut microbiota composition independent of operation type

Malbert R. C. Rogers, H. Uh, M. Bonten, 2018, bioRxiv.

Core Genome Multilocus Sequence Typing Scheme for High-Resolution Typing of Enterococcus faecium

Malbert R. C. Rogers, Janetta Top, Jukka Corander, 2015, Journal of Clinical Microbiology.

Low IgA Associated With Oropharyngeal Microbiota Changes and Lung Disease in Primary Antibody Deficiency

Malbert R. C. Rogers, H. Uh, P. D. de Jong, 2020, Frontiers in Immunology.

The Two-Component System ChtRS Contributes to Chlorhexidine Tolerance in Enterococcus faecium

Malbert R. C. Rogers, Johanna C. Braat, M. Bonten, 2017, Antimicrobial Agents and Chemotherapy.

Global Emergence and Dissemination of Enterococci as Nosocomial Pathogens: Attack of the Clones?

Malbert R. C. Rogers, J. Corander, F. Baquero, 2016, Front. Microbiol..

Prediction of the intestinal resistome by a three-dimensional structure-based method

Malbert R. C. Rogers, Jean-Michel Batto, J. Doré, 2018, Nature Microbiology.

Prediction of the intestinal resistome by a novel 3D-based method

Malbert R. C. Rogers, Jean-Michel Batto, J. Doré, 2017, bioRxiv.

University of Birmingham Prediction of the intestinal resistome by a three-dimensional structure-based method

Malbert R. C. Rogers, Xinglin Zhang, Alexandre G de Brevern, 2018 .

Antibiotic-Driven Dysbiosis Mediates Intraluminal Agglutination and Alternative Segregation of Enterococcus faecium from the Intestinal Epithelium

Malbert R. C. Rogers, M. Bonten, A. Hendrickx, 2015, mBio.

Roux-Y Gastric Bypass and Sleeve Gastrectomy directly change gut microbiota composition independent of surgery type

Malbert R. C. Rogers, H. Uh, M. Bonten, 2019, Scientific Reports.

In vitro evolution of colistin resistance in the Klebsiella pneumoniae complex follows multiple evolutionary trajectories with variable effects on fitness and virulence characteristics

Malbert R. C. Rogers, M. Bonten, W. Schaik, 2020, bioRxiv.

Draft genome sequence of the strain 16-537536, isolated from a patient with bronchiectasis and its relationship to the Pseudomonas koreensis group of the Pseudomonas fluorescens complex

Malbert R. C. Rogers, R. Cantón, J. Bayjanov, 2020, BMC Research Notes.

Sequence-Based Epidemiology of an OXA-48 Plasmid during a Hospital Outbreak

Malbert R. C. Rogers, M. Bonten, A. Schürch, 2019, Antimicrobial Agents and Chemotherapy.

Enterococcus faecium genome dynamics during long-term asymptomatic patient gut colonization

Malbert R. C. Rogers, A. Troelstra, W. van Schaik, 2019, bioRxiv.

Distinct SagA from Hospital-Associated Clade A1 Enterococcus faecium Strains Contributes to Biofilm Formation

Malbert R. C. Rogers, Johanna C. Braat, M. Bonten, 2015, Applied and Environmental Microbiology.

Enterococcus faecium genome dynamics during long-term asymptomatic patient gut colonization

Malbert R. C. Rogers, A. Troelstra, R. Willems, 2019 .

Fatal Carbapenem Resistance Development in Pseudomonas Aeruginosa Under Meropenem Monotherapy, Caused by Mutations in the Oprd Outer Membrane Porin.

Malbert R. C. Rogers, M. Rogers, A. Mavinkurve-Groothuis, 2019, The Pediatric infectious disease journal.

Evolution of Colistin Resistance in the Klebsiella pneumoniae Complex Follows Multiple Evolutionary Trajectories with Variable Effects on Fitness and Virulence Characteristics

Malbert R. C. Rogers, M. Bonten, W. van Schaik, 2020, Antimicrobial Agents and Chemotherapy.

The endometrial microbiota of women with or without a live birth within 12 months after a first failed IVF/ICSI cycle

Malbert R. C. Rogers, J. H. van de Wijgert, F. Paganelli, 2023, Scientific Reports.

Air pollution from livestock farms and the oropharyngeal microbiome of COPD patients and controls.

Malbert R. C. Rogers, M. Bonten, D. Heederik, 2022, Environment international.

Whole-genome analysis of Haemophilus influenzae strains isolated from persons with cystic fibrosis.

Malbert R. C. Rogers, M. Tunney, J. Elborn, 2022, Journal of medical microbiology.

Staphylococcal superantigen‐like protein 13 activates neutrophils via formyl peptide receptor 2

Malbert R. C. Rogers, M. Rogers, J. V. van Strijp, 2018, bioRxiv.

Genomic Characterization of Colistin Heteroresistance in Klebsiella pneumoniae during a Nosocomial Outbreak

Malbert R. C. Rogers, W. van Schaik, C. Vandenbroucke-Grauls, 2016, Antimicrobial Agents and Chemotherapy.