Stephen K Burley

发表

Outcome of a workshop on applications of protein models in biomedical research.

Roland L Dunbrack, Roland L. Dunbrack, Andrej Sali, 2009, Structure.

Outcome of the First wwPDB Hybrid/Integrative Methods Task Force Workshop.

Haruki Nakamura, Jens Meiler, Ruth Nussinov, 2015, Structure.

Federating Structural Models and Data: Outcomes from A Workshop on Archiving Integrative Structures.

Genji Kurisu, Jens Meiler, Sameer Velankar, 2019, Structure.

PDB-Dev: a Prototype System for Depositing Integrative/Hybrid Structural Models.

Genji Kurisu, Haruki Nakamura, Sameer Velankar, 2017, Structure.

Protein Data Bank (PDB): The Single Global Macromolecular Structure Archive.

Haruki Nakamura, Sameer Velankar, Gerard J Kleywegt, 2017, Methods in molecular biology.

Announcing mandatory submission of PDBx/mmCIF format files for crystallographic depositions to the Protein Data Bank (PDB).

Masashi Yokochi, Genji Kurisu, Zukang Feng, 2019, Acta crystallographica. Section D, Structural biology.

Multivariate Analyses of Quality Metrics for Crystal Structures in the PDB Archive.

Huanwang Yang, Chenghua Shao, Christine Zardecki, 2017, Structure.

Outcome of a workshop on archiving structural models of biological macromolecules.

Roland L Dunbrack, Roland L. Dunbrack, Wah Chiu, 2006, Structure.

A public database of macromolecular diffraction experiments.

Wladek Minor, Przemyslaw J Porebski, Piotr Sroka, 2016, Acta Crystallographica Section D: Structural Biology.

High-performance macromolecular data delivery and visualization for the web

Karel Berka, David Sehnal, Alexander S. Rose, 2020, Acta crystallographica. Section D, Structural biology.

OneDep: Unified wwPDB System for Deposition, Biocuration, and Validation of Macromolecular Structures in the PDB Archive.

Naohiro Kobayashi, Haruki Nakamura, Zukang Feng, 2017, Structure.

Rapid-access, high-throughput synchrotron crystallography for drug discovery.

Stephen K Burley, Stephen R Wasserman, John W Koss, 2012, Trends in pharmacological sciences.

Continuous Evaluation of Ligand Protein Predictions: A Weekly Community Challenge for Drug Docking.

Shuai Liu, Chenghua Shao, Rommie E Amaro, 2019, Structure.

Structural genomics

Stephen K Burley, S. Burley, J. Bonanno, 1999, Current Biology.

Cas5d processes pre-crRNA and is a member of a larger family of CRISPR RNA endonucleases.

Stephen K Burley, Steven C Almo, J. M. Sauder, 2012, RNA.

High throughput protein production and crystallization at NYSGXRC.

Stephen K Burley, Kevin Bain, Spencer Emtage, 2008, Methods in molecular biology.

Biophysical studies of eIF4E cap-binding protein: recognition of mRNA 5' cap structure and synthetic fragments of eIF4G and 4E-BP1 proteins.

Anne-Claude Gingras, Nahum Sonenberg, Stephen K Burley, 2002, Journal of molecular biology.

Architectural Transcription Factors: Proteins That-Remodel DNA

Stephen K Burley, S. Burley, M. H. Werner, 1997, Cell.

Divergent evolution of ligand binding in the o-succinylbenzoate synthase family.

Sugadev Ragumani, Stephen K Burley, Steven C Almo, 2013, Biochemistry.

Impact of genetic variation on three dimensional structure and function of proteins

Andreas Prlić, Roshni Bhattacharya, Peter W Rose, 2017, PloS one.

[10] Dynamic light scattering in evaluating crystallizability of macromolecules.

Stephen K Burley, A. Ferré-D’Amaré, S. Burley, 1997, Methods in enzymology.

SGX523 is an exquisitely selective, ATP-competitive inhibitor of the MET receptor tyrosine kinase with antitumor activity in vivo

Stephen K Burley, Spencer Emtage, Shane Atwell, 2009, Molecular Cancer Therapeutics.

Catalytic mechanism and three-dimensional structure of adenine deaminase.

Andrej Sali, Ashima Bagaria, Stephen K Burley, 2011, Biochemistry.

RCSB Protein Data Bank: Sustaining a living digital data resource that enables breakthroughs in scientific research and biomedical education

Zukang Feng, Helen M Berman, Cole H. Christie, 2017, Protein science : a publication of the Protein Society.

Enzymatic deamination of the epigenetic base N-6-methyladenine.

Andrej Sali, Stephen K Burley, Brian K Shoichet, 2011, Journal of the American Chemical Society.

SGX393 inhibits the CML mutant Bcr-AblT315I and preempts in vitro resistance when combined with nilotinib or dasatinib

Stephen K Burley, Sean Buchanan, Kevin Holme, 2008, Proceedings of the National Academy of Sciences.

Structures of PHR domains from Mus musculus Phr1 (Mycbp2) explain the loss-of-function mutation (Gly1092-->Glu) of the C. elegans ortholog RPM-1.

Kevin T Bain, Stephen K Burley, Shane Atwell, 2010, Journal of molecular biology.

RCSB Protein Data Bank: Enabling biomedical research and drug discovery

Chenghua Shao, Jose M. Duarte, Christine Zardecki, 2019, Protein science : a publication of the Protein Society.

X-ray structure of a Rex-family repressor/NADH complex insights into the mechanism of redox sensing.

Stephen K Burley, S. Burley, J. Bonanno, 2005, Structure.

A Novel Mode of Gleevec Binding Is Revealed by the Structure of Spleen Tyrosine Kinase*

Stephen K Burley, Shane Atwell, S. Burley, 2004, Journal of Biological Chemistry.

Structure of YqgQ protein from Bacillus subtilis, a conserved hypothetical protein.

Stephen K Burley, S. Burley, S. Swaminathan, 2010, Acta crystallographica. Section F, Structural biology and crystallization communications.

PDB40: The Protein Data Bank celebrates its 40th birthday

Stephen K Burley, 2013, Biopolymers.

Characterization of metalloproteins by high-throughput X-ray absorption spectroscopy.

Paolo Frasconi, Marco Punta, Andrea Passerini, 2011, Genome research.

SOD1 Phosphorylation by mTORC1 Couples Nutrient Sensing and Redox Regulation.

Xiaoxing Li, Stephen K Burley, Brinda Vallat, 2018, Molecular cell.

Evolution of enzymatic activities in the enolase superfamily: stereochemically distinct mechanisms in two families of cis,cis-muconate lactonizing enzymes.

Patricia C Babbitt, Stephen K Burley, Ayano Sakai, 2009, Biochemistry.

Structure and catalytic mechanism of LigI: insight into the amidohydrolase enzymes of cog3618 and lignin degradation.

Stephen K Burley, Steven C Almo, J. M. Sauder, 2012, Biochemistry.

Structural Variation in Bacterial Glyoxalase I Enzymes

Stephen K Burley, J. M. Sauder, S. Burley, 2011, The Journal of Biological Chemistry.

The archiving and dissemination of biological structure data.

Haruki Nakamura, Sameer Velankar, Gerard J Kleywegt, 2016, Current opinion in structural biology.

Cocrystal structures of diaminopimelate decarboxylase: mechanism, evolution, and inhibition of an antibiotic resistance accessory factor.

Alexander Tomasz, Stephen K Burley, A. Tomasz, 2002, Structure.

Recognition of Polyadenylate RNA by the Poly(A)-Binding Protein

Rahul C. Deo, Nahum Sonenberg, Stephen K Burley, 1999, Cell.

Outcome of the First wwPDB/CCDC/D3R Ligand Validation Workshop.

Haruki Nakamura, Evan Bolton, Zukang Feng, 2016, Structure.

Computation-facilitated assignment of the function in the enolase superfamily: a regiochemically distinct galactarate dehydratase from Oceanobacillus iheyensis .

Matthew P Jacobson, Chakrapani Kalyanaraman, Stephen K Burley, 2009, Biochemistry.

Transcription factor complexes.

Stephen K Burley, S. Burley, K. Kamada, 2002, Current opinion in structural biology.

A modular cross-linking approach for exploring protein interactions.

David Fenyö, Tom W Muir, Stephen K Burley, 2002, Journal of the American Chemical Society.