Nicholas H. Bergman

Assessment of Gene Annotation Accuracy by Inferring Transcripts from RNA-Seq

Wenhan Zhu, Jeffrey Martin, Mark Borodovsky, 2009, 2009 IEEE International Conference on Bioinformatics and Biomedicine.

Efficient mapping of Applied Biosystems SOLiD sequence data to a reference genome for functional genomic applications

Brian D. Ondov, Nicholas H. Bergman, Anjana Varadarajan, 2008, Bioinform..

Bacillus anthracis genome organization in light of whole transcriptome sequencing

Wenhan Zhu, Jeffrey Martin, Mark Borodovsky, 2010, BMC Bioinformatics.

Interactive metagenomic visualization in a Web browser

Adam M. Phillippy, Brian D. Ondov, Nicholas H. Bergman, 2011, BMC Bioinformatics.

An alignment algorithm for bisulfite sequencing using the Applied Biosystems SOLiD System

Brian D. Ondov, Miroslav Dudas, Nicholas H. Bergman, 2010, Bioinform..

Draft Genome Sequences from a Novel Clade of Bacillus cereus Sensu Lato Strains, Isolated from the International Space Station

Sergey Koren, Todd J. Treangen, Jonathan E. Allen, 2017, Genome Announcements.

Mash: fast genome and metagenome distance estimation using MinHash

Sergey Koren, Adam M. Phillippy, Páll Melsted, 2015 .

Operon Prediction for Sequenced Bacterial Genomes without Experimental Information

Zhaohui S. Qin, Nicholas H. Bergman, Karla D. Passalacqua, 2006, Applied and Environmental Microbiology.

Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation

Sergey Koren, Adam M. Phillippy, Konstantin Berlin, 2016, bioRxiv.

Filovirus RefSeq Entries: Evaluation and Selection of Filovirus Type Variants, Type Sequences, and Names

Jens H. Kuhn, Ralf G. Dietzgen, J. Rodney Brister, 2014, Viruses.