Orly Alter

发表

Genomic Signal Processing: Predicting Basic Molecular Biological Principles

Orly Alter, 2005 .

Reconstructing the pathways of a cellular system from genome-scale signals by using matrix and tensor computations.

Gene H Golub, Orly Alter, G. Golub, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Processing and modeling genome-wide expression data using singular value decomposition

David Botstein, Patrick O. Brown, Orly Alter, 2001, SPIE BiOS.

Discovery of Mechanisms from Mathematical Modeling of DNA Microarray Data: Computational Prediction and Experimental Verification

Orly Alter, 2010 .

Genomic signal processing: from matrix algebra to genetic networks.

Orly Alter, O. Alter, 2007, Methods in molecular biology.

Variation in gene expression patterns in follicular lymphoma and the response to rituximab

David Botstein, Olga G. Troyanskaya, Patrick O. Brown, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Mathematically universal and biologically consistent astrocytoma genotype encodes for transformation and predicts survival phenotype

Orly Alter, O. Alter, Katherine A. Aiello, 2018, APL bioengineering.

Singular value decomposition of genome-scale mRNA lengths distribution reveals asymmetry in RNA gel electrophoresis band broadening

Gene H Golub, Orly Alter, G. Golub, 2006, Proceedings of the National Academy of Sciences.

NOVEL GENOME-SCALE CORRELATION BETWEEN DNA REPLICATION AND RNA TRANSCRIPTION DURING THE CELL CYCLE IN YEAST IS PREDICTED BY DATA-DRIVEN MODELS

Gene H. Golub, David Botstein, Patrick O. Brown, 2004 .

Integrative analysis of genome-scale data by using pseudoinverse projection predicts novel correlation between DNA replication and RNA transcription.

Gene H Golub, Orly Alter, G. Golub, 2004, Proceedings of the National Academy of Sciences of the United States of America.

Tensor Decomposition Reveals Concurrent Evolutionary Convergences and Divergences and Correlations with Structural Motifs in Ribosomal RNA

Orly Alter, Andrew M. Gross, Robin R. Gutell, 2011, PloS one.

GSVD Comparison of Patient-Matched Normal and Tumor aCGH Profiles Reveals Global Copy-Number Alterations Predicting Glioblastoma Multiforme Survival

Orly Alter, Preethi Sankaranarayanan, O. Alter, 2012, PloS one.

Tensor GSVD of Patient- and Platform-Matched Tumor and Normal DNA Copy-Number Profiles Uncovers Chromosome Arm-Wide Patterns of Tumor-Exclusive Platform-Consistent Alterations Encoding for Cell Transformation and Predicting Ovarian Cancer Survival

Orly Alter, Preethi Sankaranarayanan, O. Alter, 2015, PloS one.