Arlen W. Johnson

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F1000Prime recommendation of A novel class of microRNA-recognition elements that function only within open reading frames.

Arlen W. Johnson, 2018 .

Faculty Opinions recommendation of The Ccr4-Not complex monitors the translating ribosome for codon optimality.

Arlen W. Johnson, 2020 .

Tightly-orchestrated rearrangements govern catalytic center assembly of the ribosome.

Arlen W. Johnson, David W. Taylor, Yi Zhou, 2019 .

Exome sequencing identifies mutation in CNOT3 and ribosomal genes RPL5 and RPL10 in T-cell acute lymphoblastic leukemia

Stein Aerts, Gert Hulselmans, Jan Cools, 2012, Nature Genetics.

Understanding Biases in Ribosome Profiling Experiments Reveals Signatures of Translation Dynamics in Yeast

Jeffrey A. Hussmann, Arlen W. Johnson, W. Press, 2015, bioRxiv.

Nmd3p Is a Crm1p-Dependent Adapter Protein for Nuclear Export of the Large Ribosomal Subunit

Arlen W. Johnson, G. Kallstrom, George Kallstrom, 2000, The Journal of cell biology.

Mutational Analysis of the Ribosomal Protein Rpl10 from Yeast*

Arlen W. Johnson, Anne Hofer, Cyril Bussiere, 2007, Journal of Biological Chemistry.

Ribosome stalk assembly requires the dual-specificity phosphatase Yvh1 for the exchange of Mrt4 with P0

Edward M. Marcotte, Zhihua Li, Arlen W. Johnson, 2009, The Journal of cell biology.

Rational Extension of the Ribosome Biogenesis Pathway Using Network-Guided Genetics

Insuk Lee, Edward M. Marcotte, Zhihua Li, 2009, PLoS biology.

Bud23 Methylates G1575 of 18S rRNA and Is Required for Efficient Nuclear Export of Pre-40S Subunits

Janusz M. Bujnicki, Edward M. Marcotte, Zhihua Li, 2008, Molecular and Cellular Biology.

Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis

Arlen W. Johnson, J. Frank, S. Musalgaonkar, 2017, The EMBO journal.

Integrity of the P-site is probed during maturation of the 60S ribosomal subunit

Arlen W. Johnson, J. Frank, Y. Hashem, 2012, The Journal of cell biology.

Utp14 Recruits and Activates the RNA Helicase Dhr1 To Undock U3 snoRNA from the Preribosome

Arlen W. Johnson, C. C. Correll, Xin Liu, 2016, Molecular and Cellular Biology.

Regulation of Ribosome Biogenesis by Nucleostemin 3 Promotes Local and Systemic Growth in Drosophila

Arlen W. Johnson, M. Scott, M. Fish, 2013, Genetics.

Utp14 recruits and activates the RNA helicase Dhr1 to undock U3 snoRNA from the pre-ribosome APPROVED BY SUPERVISING COMMITTEE:

Arlen W. Johnson, S. Stevens, Jieyi Zhu, 2016 .

Molecular and Genetic Analysis of the Gene Encoding the Saccharomyces cerevisiae Strand Exchange Protein Sepl

Arlen W. Johnson, R. Kolodner, D. Tishkoff, 2003 .

The role of Rat1 in coupling mRNA 3'-end processing to transcription termination: implications for a unified allosteric-torpedo model.

Arlen W. Johnson, D. Bentley, Weifei Luo, 2006, Genes & development.

Of blood, bones, and ribosomes: is Swachman-Diamond syndrome a ribosomopathy?

Arlen W. Johnson, S. Ellis, 2011, Genes & development.

The T-cell leukemia related rpl10-R98S mutant traps the 60S export adapter Nmd3 in the ribosomal P site in yeast

Arlen W. Johnson, S. Musalgaonkar, Stephanie Patchett, 2017, PLoS genetics.

Homogeneous Escherichia coli Endonuclease IV

Arlen W. Johnson, Bruce DempleS, J. Levin, 1988 .

Tightly-orchestrated rearrangements govern catalytic center assembly of the ribosome

Arlen W. Johnson, David W. Taylor, Yi Zhou, 2018, Nature Communications.

Bcp1 Is the Nuclear Chaperone of Rpl23 in Saccharomyces cerevisiae*

Arlen W. Johnson, Ting-Jun Lu, K. Lo, 2016, The Journal of Biological Chemistry.

Ribosomes: Lifting the Nuclear Export Ban

Arlen W. Johnson, 2014, Current Biology.

Eukaryotic rpL10 drives ribosomal rotation

Arlen W. Johnson, J. Dinman, Stephanie Patchett, 2013, Nucleic acids research.

Defining the pathway of cytoplasmic maturation of the 60S ribosomal subunit.

Arlen W. Johnson, E. Marcotte, Zhihua Li, 2010, Molecular cell.

Maturation of eukaryotic ribosomes: acquisition of functionality.

V. G. Panse, Arlen W. Johnson, 2010, Trends in biochemical sciences.

Nuclear Recycling of the Pre-60S Ribosomal Subunit-Associated Factor Arx1 Depends on Rei1 in Saccharomyces cerevisiae

Arlen W. Johnson, Nai-Jung Hung, 2006, Molecular and Cellular Biology.

Defining the Order in Which Nmd3p and Rpl10p Load onto Nascent 60S Ribosomal Subunits

Matthew West, Arlen W. Johnson, Matthew West, 2005, Molecular and Cellular Biology.

The methyltransferase adaptor protein Trm112 is involved in biogenesis of both ribosomal subunits

Arlen W. Johnson, Richa Sardana, 2012, Molecular biology of the cell.

Saccharomyces cerevisiae RAI1 (YGL246c) Is Homologous to Human DOM3Z and Encodes a Protein That Binds the Nuclear Exoribonuclease Rat1p

Arlen W. Johnson, Insuk Lee, G. Kallstrom, 2000, Molecular and Cellular Biology.

The Putative GTPases Nog1p and Lsg1p Are Required for 60S Ribosomal Subunit Biogenesis and Are Localized to the Nucleus and Cytoplasm, Respectively

Arlen W. Johnson, G. Kallstrom, J. Hedges, 2003, Molecular and Cellular Biology.

Release of the ribosome biogenesis factor Bud23 from small subunit precursors in yeast

Arlen W. Johnson, Joshua J. Black, 2021, bioRxiv.

Tsr4 Is a Cytoplasmic Chaperone for the Ribosomal Protein Rps2 in Saccharomyces cerevisiae

Arlen W. Johnson, S. Musalgaonkar, Joshua J. Black, 2019, Molecular and Cellular Biology.

Bypass of the pre-60S ribosomal quality control as a pathway to oncogenesis

Arlen W. Johnson, J. Dinman, Stephanie Patchett, 2014, Proceedings of the National Academy of Sciences.

XRN1 Is a Species-Specific Virus Restriction Factor in Yeasts

Sara L. Sawyer, Brandon Ho, Arlen W. Johnson, 2016, bioRxiv.

The L1 stalk is required for efficient export of nascent large ribosomal subunits in yeast

Arlen W. Johnson, S. Musalgaonkar, Joshua J. Black, 2019, bioRxiv.

Utp14 interaction with the small subunit processome

Arlen W. Johnson, L. Goering, Joshua J. Black, 2018, bioRxiv.

Bcp 1 is the Nuclear Chaperone of the 60 S ribosomal protein Rpl 23 in Saccharomyces cerevisiae

Arlen W. Johnson, Ting-Jun Lu, Suresh Kumar, 2016 .

Physical and Functional Interaction between the Methyltransferase Bud23 and the Essential DEAH-Box RNA Helicase Ecm16

Arlen W. Johnson, Michael Gill, Richa Sardana, 2014, Molecular and Cellular Biology.

The rRNA methyltransferase Bud23 shows functional interaction with components of the SSU processome and RNase MRP.

Arlen W. Johnson, Joshua P. White, Richa Sardana, 2013, RNA.

Las1 interacts with Grc3 polynucleotide kinase and is required for ribosome synthesis in Saccharomyces cerevisiae

Arlen W. Johnson, C. Denicourt, Richa Sardana, 2012, Nucleic acids research.

Las 1 interacts with Grc 3 polynucleotide kinase and is required for ribosome synthesis in Saccharomyces cerevisiae

Arlen W. Johnson, C. Denicourt, Richa Sardana, 2013 .

Dominant Mutations in the Late 40S Biogenesis Factor Ltv1 Affect Cytoplasmic Maturation of the Small Ribosomal Subunit in Saccharomyces cerevisiae

Arlen W. Johnson, R. M. Seiser, D. Lycan, 2010, Genetics.

Arx1 is a nuclear export receptor for the 60S ribosomal subunit in yeast.

Arlen W. Johnson, Samir S. Patel, K. Helmke, 2007, Molecular biology of the cell.

Release of the export adapter, Nmd3p, from the 60S ribosomal subunit requires Rpl10p and the cytoplasmic GTPase Lsg1p

Arlen W. Johnson, Matthew West, J. Hedges, 2005, The EMBO journal.

Nuclear export of ribosomal subunits.

Arlen W. Johnson, E. Lund, J. Dahlberg, 2002, Trends in biochemical sciences.

Genetics animates structure: leveraging genetic interactions to study the dynamics of ribosome biogenesis

Arlen W. Johnson, Joshua J. Black, 2021, Current Genetics.

Genetic Analysis of the Ribosome Biogenesis Factor Ltv1 of Saccharomyces cerevisiae

Arlen W. Johnson, J. Merwin, D. Lycan, 2014, Genetics.

Bud23 promotes the final disassembly of the small subunit Processome in Saccharomyces cerevisiae

Arlen W. Johnson, Richa Sardana, Joshua J. Black, 2020, PLoS genetics.

Bud23 promotes the progression of the Small Subunit Processome to the pre-40S ribosome in Saccharomyces cerevisiae

Arlen W. Johnson, Richa Sardana, Joshua J. Black, 2020, bioRxiv.

The DEAH-box Helicase Dhr1 Dissociates U3 from the Pre-rRNA to Promote Formation of the Central Pseudoknot

Arlen W. Johnson, E. Marcotte, D. Tollervey, 2015, PLoS biology.

A single 2′-O-methylation of ribosomal RNA gates assembly of a functional ribosome

Arlen W. Johnson, David W. Taylor, Jack P. K. Bravo, 2022, bioRxiv.

Nascent 60 S ribosomal subunits enter the free pool bound by Nmd 3 p

Arlen W. Johnson, G. Kallstrom, HO JENNIFERHEI-NGAM, 2000 .

NMD3 Encodes an Essential Cytoplasmic Protein Required for Stable 60S Ribosomal Subunits inSaccharomyces cerevisiae

Arlen W. Johnson, J. Ho, 1999, Molecular and Cellular Biology.

Coordinated nuclear export of 60S ribosomal subunits and NMD3 in vertebrates

Arlen W. Johnson, E. Lund, J. Dahlberg, 2003, The EMBO journal.

Low frequency mutations in ribosomal proteins RPL10 and RPL5 in multiple myeloma

Arlen W. Johnson, P. Sonneveld, L. Michaux, 2017, Haematologica.

The specialized cytosolic J-protein, Jjj1, functions in 60S ribosomal subunit biogenesis

Arlen W. Johnson, E. Craig, Alison E. Meyer, 2007, Proceedings of the National Academy of Sciences.

Reengineering ribosome export.

Arlen W. Johnson, K. Lo, 2009, Molecular biology of the cell.

Domain interactions within the Ski2/3/8 complex and between the Ski complex and Ski7p.

Arlen W. Johnson, Marc S. Lewis, Lingna Wang, 2005, RNA.

Oxidative Damage: DNA Repair and Inducible Resistance

Arlen W. Johnson, J. Greenberg, B. Demple, 1987 .

Characterization of the nuclear export adaptor protein Nmd3 in association with the 60S ribosomal subunit

Arlen W. Johnson, Matthew West, J. Frank, 2010, The Journal of cell biology.

Mapping the Functional Domains of Yeast NMD3, the Nuclear Export Adapter for the 60 S Ribosomal Subunit*

Arlen W. Johnson, C. Bussiere, Matthew West, 2006, Journal of Biological Chemistry.

Yeast DNA 3'-repair diesterase is the major cellular apurinic/apyrimidinic endonuclease: substrate specificity and kinetics.

Arlen W. Johnson, B. Demple, A. Johnson, 1988, The Journal of biological chemistry.

Novel Interaction of the 60S Ribosomal Subunit Export Adapter Nmd3 at the Nuclear Pore Complex*

Arlen W. Johnson, Matthew West, J. Hedges, 2007, Journal of Biological Chemistry.

Yeast structural gene (APN1) for the major apurinic endonuclease: homology to Escherichia coli endonuclease IV.

Arlen W. Johnson, S C Popoff, A I Spira, 1990, Proceedings of the National Academy of Sciences of the United States of America.

The yeast antiviral proteins Ski2p, Ski3p, and Ski8p exist as a complex in vivo.

Arlen W. Johnson, Justin T. Brown, A. Johnson, 2000, RNA.

Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit

Arlen W. Johnson, David W. Taylor, Yi Zhou, 2019 .

Exonuclease III and endonuclease IV remove 3' blocks from DNA synthesis primers in H2O2-damaged Escherichia coli.

Arlen W. Johnson, B. Demple, A. Johnson, 1986, Proceedings of the National Academy of Sciences of the United States of America.

Defining the pathway of cytoplasmic maturation of the 60S ribosomal subunit.

Arlen W. Johnson, E. Marcotte, Zhihua Li, 2010, Molecular cell.

Saccharomyces cerevisiae Proteins That Promote Hybrid DNA Formation in Vitro

Arlen W. Johnson, W. Heyer, R. Kolodner, 1992 .