Lars Wienbrandt

发表

Massively parallel FPGA-based implementation of BLASTp with the two-hit method

Lars Wienbrandt, Stefan Baumgart, Jost Bissel, 2011, ICCS.

UPC++ for bioinformatics: A case study using genome-wide association studies

Bertil Schmidt, Lars Wienbrandt, Jorge González-Domínguez, 2014, 2014 IEEE International Conference on Cluster Computing (CLUSTER).

Bioinformatics Applications on the FPGA-Based High-Performance Computer RIVYERA

Lars Wienbrandt, Lars Wienbrandt, 2013 .

High-speed exhaustive 3-locus interaction epistasis analysis on FPGAs

Bertil Schmidt, Lars Wienbrandt, Manfred Schimmler, 2015, J. Comput. Sci..

Fast Genome-Wide Third-order SNP Interaction Tests with Information Gain on a Low-cost Heterogeneous Parallel FPGA-GPU Computing Architecture

Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, 2017, ICCS.

Using the reconfigurable massively parallel architecture COPACOBANA 5000 for applications in bioinformatics

Lars Wienbrandt, Stefan Baumgart, Jost Bissel, 2010, ICCS.

An FPGA Implementation of an Investment Strategy Processor

Lars Wienbrandt, Manfred Schimmler, Christoph Starke, 2012, ICCS.

Combining GPU and FPGA technology for efficient exhaustive interaction analysis in GWAS

Lars Wienbrandt, Manfred Schimmler, Jorge González-Domínguez, 2016, 2016 IEEE 27th International Conference on Application-specific Systems, Architectures and Processors (ASAP).

Large-scale genome-wide association studies on a GPU cluster using a CUDA-accelerated PGAS programming model

Bertil Schmidt, Lars Wienbrandt, Jorge González-Domínguez, 2015, Int. J. High Perform. Comput. Appl..

An efficient implementation of PBKDF2 with RIPEMD-160 on multiple FPGAs

Lars Wienbrandt, Manfred Schimmler, Ayman Abbas, 2014, 2014 20th IEEE International Conference on Parallel and Distributed Systems (ICPADS).

Reference-Based Haplotype Phasing with FPGAs

Lars Wienbrandt, Jan Christian Kässens, David Ellinghaus, 2020, ICCS.

Improvement of BLASTp on the FPGA-Based High-Performance Computer RIVYERA

Lars Wienbrandt, Manfred Schimmler, Daniel Siebert, 2012, ISBRA.

COPACOBANA: A Massively Parallel FPGA-Based Computer Architecture

Lars Wienbrandt, Jost Bissel, Manfred Schimmler, 2010 .

High-Performance Cryptanalysis on RIVYERA and COPACOBANA Computing Systems

Tim Güneysu, Christof Paar, Lars Wienbrandt, 2013 .

FPGAs in Bioinformatics - Implementation and Evaluation of Common Bioinformatics Algorithms in Reconfigurable Logic

Lars Wienbrandt, L. Wienbrandt, Lars Wienbrandt, 2016 .

Dictionary Attack on TrueCrypt with RIVYERA S3-5000

Lars Wienbrandt, Manfred Schimmler, Ayman Abbas, 2012, 2012 IEEE 18th International Conference on Parallel and Distributed Systems.

1000× faster than PLINK: Combined FPGA and GPU accelerators for logistic regression-based detection of epistasis

Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, 2019, J. Comput. Sci..

The FPGA-Based High-Performance Computer RIVYERA for Applications in Bioinformatics

Lars Wienbrandt, 2014, CiE.

Hybrid CPU/GPU Acceleration of Detection of 2-SNP Epistatic Interactions in GWAS

Bertil Schmidt, Lars Wienbrandt, Jorge González-Domínguez, 2014, Euro-Par.

Optimizing Investment Strategies with the Reconfigurable Hardware Platform RIVYERA

Lars Wienbrandt, Manfred Schimmler, Christoph Starke, 2012, Int. J. Reconfigurable Comput..

1,000x Faster than PLINK: Genome-Wide Epistasis Detection with Logistic Regression Using Combined FPGA and GPU Accelerators

Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, 2018 .

Collecting Statistical Information in DNA Sequences for the Detection of Special Motifs

Lars Wienbrandt, Manfred Schimmler, 2010, BIOCOMP.

Parallelizing Epistasis Detection in GWAS on FPGA and GPU-Accelerated Computing Systems

Bertil Schmidt, Lars Wienbrandt, Manfred Schimmler, 2015, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Genome-Wide Association Interaction Studies with MB-MDR and maxT multiple testing correction on FPGAs

Lars Wienbrandt, Jan Christian Kässens, Sven Gundlach, 2016, ICCS.

Network Aggregation to Enhance Results Derived from Multiple Analytics

Lars Wienbrandt, Kristel Van Steen, Diane Duroux, 2020, AIAI.

1, 000x Faster Than PLINK: Genome-Wide Epistasis Detection with Logistic Regression Using Combined FPGA and GPU Accelerators

Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, 2018, ICCS.

Comparison of Markov Chain Monte Carlo Software for the Evolutionary Analysis of Y-Chromosomal Microsatellite Data

Lars Wienbrandt, Michael Krawczak, Amke Caliebe, 2019, Computational and structural biotechnology journal.

Massively Parallelized DNA Motif Search on the Reconfigurable Hardware Platform COPACOBANA

Jan Schröder, Lars Wienbrandt, Manfred Schimmler, 2008, PRIB.

FPGA-based Acceleration of Detecting Statistical Epistasis in GWAS

Bertil Schmidt, Lars Wienbrandt, Manfred Schimmler, 2014, ICCS.

BIGwas: Single-command quality control and association testing for multi-cohort and biobank-scale GWAS/PheWAS data

Lars Wienbrandt, Jan Christian Kässens, David Ellinghaus, 2021, GigaScience.