Meredith Yeager

发表

SomaticCombiner: improving the performance of somatic variant calling based on evaluation tests and a consensus approach

Wen Luo, Bin Zhu, Mingyi Wang, 2020, Scientific Reports.

ION TORRENT LIBRARY PREPARATION PROCESS USING KAPABIOSYSTEMS LIBRARY QUANTIFICATION KIT SIGNIFICANTLY INCREASES QUANTITATIVE SENSITIVITY AND IMPROVES SAMPLE POOLING FOR MULTIPLEXED SEQUENCING

Stephen J. Chanock, Timothy Myers, Amy Hutchinson, 2011 .

Abstract 3273: rkmh: A MinHash toolbox for analyzing HPV coinfections

Richard Durbin, Eric T. Dawson, Sarah Wagner, 2018 .

Fine mapping of a region of chromosome 11q13 reveals multiple independent loci associated with risk of prostate cancer.

Peter Kraft, Nilanjan Chatterjee, Fredrik Wiklund, 2011, Human molecular genetics.

Cytokine polymorphisms in the Th1/Th2 pathway and susceptibility to non-Hodgkin lymphoma.

Peter Boyle, Nathaniel Rothman, Robert Welch, 2006, Blood.

Interactions between household air pollution and GWAS-identified lung cancer susceptibility markers in the Female Lung Cancer Consortium in Asia (FLCCA)

Chien-Chung Lin, Li Jin, Nilanjan Chatterjee, 2015, Human Genetics.

A genome-wide association study of marginal zone lymphoma shows association to the HLA region

Paolo Vineis, Peter Kraft, Lucia Miligi, 2015, Nature Communications.

Effects of Natural Selection on Interpopulation Divergence at Polymorphic Sites in Human Protein-Coding Loci

Robert Welch, Stephen J Chanock, Meredith Yeager, 2005, Genetics.

Mosaic chromosome 20q deletions are more frequent in the aging population.

Nathaniel Rothman, Stephen J Chanock, Meredith Yeager, 2017, Blood advances.

Mosaic loss of chromosome Y is associated with common variation near TCL1A

Jian Gu, Sonja Berndt, Nathaniel Rothman, 2016, Nature Genetics.

Genetic variation in TNF and IL10 and risk of non-Hodgkin lymphoma: a report from the InterLymph Consortium.

Theodore R Holford, Angela Brooks-Wilson, Nathaniel Rothman, 2006, The Lancet. Oncology.

Identification of a new prostate cancer susceptibility locus on chromosome 8q24

Peter Kraft, Pär Stattin, Nilanjan Chatterjee, 2009, Nature Genetics.

Genewindow: an interactive tool for visualization of genomic variation

Hugues Sicotte, Brian Staats, Stephen J Chanock, 2005, Nature Genetics.

Female chromosome X mosaicism is age-related and preferentially affects the inactivated X chromosome

William Wheeler, Nan Hu, Peter Kraft, 2016, Nature Communications.

Polymorphisms in immunoregulatory genes, smoky coal exposure and lung cancer risk in Xuan Wei, China.

Robert Welch, Qing Lan, Tongzhang Zheng, 2007, Carcinogenesis.

Genome-wide association study identifies multiple risk loci for renal cell carcinoma

Bin Tean Teh, Tony Fletcher, Peter Kraft, 2017, Nature Communications.

Oxidative damage-related genes AKR1C3 and OGG1 modulate risks for lung cancer due to exposure to PAH-rich coal combustion emissions.

Nathaniel Rothman, Robert Welch, Qing Lan, 2004, Carcinogenesis.

Genetically predicted longer telomere length is associated with increased risk of B-cell lymphoma subtypes.

Paolo Vineis, Theodore R Holford, Peter Kraft, 2016, Human molecular genetics.

Lead, Genetic Susceptibility, and Risk of Adult Brain Tumors

Patricia A Stewart, Nathaniel Rothman, Preetha Rajaraman, 2006, Cancer Epidemiology Biomarkers & Prevention.

NAT2 slow acetylation and GSTM1 null genotypes increase bladder cancer risk: results from the Spanish Bladder Cancer Study and meta-analyses

Nilanjan Chatterjee, Debra Silverman, Núria Malats, 2008 .

CYP 1 A 1 Val 462 and NQO 1 Ser 187 polymorphisms , cigarette use , and risk for colorectal adenoma

Nilanjan Chatterjee, Neil E. Caporaso, Stephen J. Chanock, 2005 .

Genome-wide association study of glioma and meta-analysis

Melissa Bondy, Nilanjan Chatterjee, John K. Wiencke, 2012, Human Genetics.

Cytokine polymorphisms in the Th1/Th2 pathway and susceptibility to non-Hodgkin lymphoma.

Theodore R Holford, Peter Boyle, Nathaniel Rothman, 2006, Blood.

Pathway-based evaluation of 380 candidate genes and lung cancer susceptibility suggests the importance of the cell cycle pathway.

Nilanjan Chatterjee, Stephen J Chanock, Qing Lan, 2008, Carcinogenesis.

Genome-Wide and Candidate Gene Association Study of Cigarette Smoking Behaviors

William Wheeler, Peter Kraft, Nilanjan Chatterjee, 2009, PloS one.

Common genetic variants in proinflammatory and other immunoregulatory genes and risk for non-Hodgkin lymphoma.

Nilanjan Chatterjee, Nathaniel Rothman, Stephen J Chanock, 2006, Cancer research.

High-throughput single nucleotide polymorphism genotyping using nanofluidic Dynamic Arrays

Ramesh Ramakrishnan, Sonja Berndt, Jun Wang, 2009, BMC Genomics.

Two high-risk susceptibility loci at 6p25.3 and 14q32.13 for Waldenström macroglobulinemia

Paolo Vineis, Peter Kraft, Bin Zhu, 2018, Nature Communications.

Fine mapping the KLK3 locus on chromosome 19q13.33 associated with prostate cancer susceptibility and PSA levels

Nilanjan Chatterjee, Stephen J. Chanock, Richard B. Hayes, 2011, Human Genetics.

Common Genetic Variants in Prostate Cancer Risk Prediction—Results from the NCI Breast and Prostate Cancer Cohort Consortium (BPC3)

Peter Kraft, Jing Ma, Mattias Johansson, 2012, Cancer Epidemiology, Biomarkers & Prevention.

A genome-wide association study of lung cancer identifies a region of chromosome 5p15 associated with risk for adenocarcinoma.

Ying Wang, William Wheeler, Andres Metspalu, 2009, American journal of human genetics.

Nucleotide Excision Repair Gene Polymorphisms and Risk of Advanced Colorectal Adenoma: XPC Polymorphisms Modify Smoking-Related Risk

Nilanjan Chatterjee, Robert Welch, Stephen J Chanock, 2006, Cancer Epidemiology Biomarkers & Prevention.

Analysis of Heritability and Shared Heritability Based on Genome-Wide Association Studies for Thirteen Cancer Types.

Jian Su, Wen Tan, Paolo Vineis, 2015, Journal of the National Cancer Institute.

Improved imputation of common and uncommon SNPs with a new reference set

Nilanjan Chatterjee, Mark P Purdue, Amy Hutchinson, 2011, Nature Genetics.

Genome-wide association study identifies multiple susceptibility loci for diffuse large B-cell lymphoma

Paolo Vineis, Theodore R Holford, Peter Kraft, 2014, Nature Genetics.

Genetic variant in TP63 on locus 3q28 is associated with risk of lung adenocarcinoma among never-smoking females in Asia

Wen Tan, Chien-Chung Lin, Chang Ho Kim, 2012, Human Genetics.

Characterizing Associations and SNP-Environment Interactions for GWAS-Identified Prostate Cancer Risk Markers—Results from BPC3

Peter Kraft, Jing Ma, Mattias Johansson, 2011, PloS one.

Genome-wide association study of renal cell carcinoma identifies two susceptibility loci on 2p21 and 11q13.3

Paolo Vineis, Salvatore Panico, Vittorio Krogh, 2011, Nature Genetics.

Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array

Peter Kraft, Anssi Auvinen, Henrik Gronberg, 2013, Nature Genetics.

Genome‐wide association study identifies the GLDC/IL33 locus associated with survival of osteosarcoma patients

David M. Thomas, Irene L Andrulis, Stephen J Chanock, 2018, International journal of cancer.

CYP1A1 Val462 and NQO1 Ser187 polymorphisms, cigarette use, and risk for colorectal adenoma.

Nilanjan Chatterjee, Stephen J Chanock, Lifang Hou, 2005, Carcinogenesis.

Evaluation of genetic variation in the double-strand break repair pathway and bladder cancer risk.

Debra Silverman, Jonine D Figueroa, Núria Malats, 2007, Carcinogenesis.

Polymorphisms in estrogen- and androgen-metabolizing genes and the risk of gastric cancer.

Witold Zatonski, Christian C Abnet, Stephen J Chanock, 2009, Carcinogenesis.

Coevolution of the mammalian chemokines and their receptors

Austin L. Hughes, Meredith Yeager, A. Hughes, 1999, Immunogenetics.

Common genetic variation in TP53 and its flanking genes, WDR79 and ATP1B2, and susceptibility to breast cancer

Robert Welch, Charles M Perou, Vessela Kristensen, 2007, International journal of cancer.

Meta-analysis of genome-wide association studies discovers multiple loci for chronic lymphocytic leukemia

Paolo Vineis, Theodore R Holford, Peter Kraft, 2016, Nature Communications.

A genome-wide association study of bladder cancer identifies a new susceptibility locus within SLC14A1, a urea transporter gene on chromosome 18q12.3.

Jian Gu, Nilanjan Chatterjee, Jonine D Figueroa, 2011, Human molecular genetics.

Characterization of large structural genetic mosaicism in human autosomes.

William Wheeler, Nan Hu, Peter Kraft, 2015, American journal of human genetics.

A subset-based approach improves power and interpretation for the combined analysis of genetic association studies of heterogeneous traits.

Nilanjan Chatterjee, Stephen J Chanock, Preetha Rajaraman, 2012, American journal of human genetics.

Association between GWAS-identified lung adenocarcinoma susceptibility loci and EGFR mutations in never-smoking Asian women, and comparison with findings from Western populations

Ping Wang, Junjie Wu, Jian Su, 2016, Human molecular genetics.

Pooled analysis of phosphatidylinositol 3-kinase pathway variants and risk of prostate cancer.

Peter Kraft, Jing Ma, Stella Koutros, 2010, Cancer research.

Germline variation in NCF4, an innate immunity gene, is associated with an increased risk of colorectal cancer

Julie Goodman, Meredith Yeager, Krista A. Zanetti, 2014, International journal of cancer.

Genome-wide association study of glioma subtypes identifies specific differences in genetic susceptibility to glioblastoma and non-glioblastoma tumors

Hugues Sicotte, Jill S Barnholtz-Sloan, Jeanette E Eckel-Passow, 2017, Nature Genetics.

Polymorphisms in GSTT1, GSTZ1, and CYP2E1, Disinfection By-products, and Risk of Bladder Cancer in Spain

Nathaniel Rothman, Francisco X. Real, Debra T. Silverman, 2010, Environmental health perspectives.

Detectable clonal mosaicism and its relationship to aging and cancer

William Wheeler, Nan Hu, Peter Kraft, 2012, Nature Genetics.

A meta-analysis of genome-wide association studies to identify prostate cancer susceptibility loci associated with aggressive and non-aggressive disease.

Suzanne Chambers, Peter Kraft, Anssi Auvinen, 2013, Human molecular genetics.

The new sequencer on the block: comparison of Life Technology’s Proton sequencer to an Illumina HiSeq for whole-exome sequencing

Stephen J. Chanock, Meredith Yeager, Michael Dean, 2013, Human Genetics.

Genome-wide Association Study Identiﬁes Five Susceptibility Loci for Follicular Lymphoma outside the HLA Region

Jian Gu, Paolo Vineis, Theodore R Holford, 2022 .

Promoter variants in the MSMB gene associated with prostate cancer regulate MSMB/NCOA4 fusion transcripts

Thomas D. Schneider, Stephen J. Chanock, T. D. Schneider, 2012, Human Genetics.

A multi-stage genome-wide association study of bladder cancer identifies multiple susceptibility loci

William Wheeler, Tony Fletcher, Paolo Vineis, 2010, Nature Genetics.

Large-Scale Evaluation of Candidate Genes Identifies Associations between VEGF Polymorphisms and Bladder Cancer Risk

Nilanjan Chatterjee, Debra Silverman, Núria Malats, 2007, PLoS genetics.

Imputation and subset-based association analysis across different cancer types identifies multiple independent risk loci in the TERT-CLPTM1L region on chromosome 5p15.33.

William Wheeler, Hideo Tanaka, Jianxin Shi, 2014, Human molecular genetics.

Common Gene Variants in the Tumor Necrosis Factor (TNF) and TNF Receptor Superfamilies and NF-kB Transcription Factors and Non-Hodgkin Lymphoma Risk

Bruce K. Armstrong, Nilanjan Chatterjee, Nathaniel Rothman, 2009, PloS one.

SLC6A3 and body mass index in the Prostate, Lung, Colorectal and Ovarian Cancer Screening Trial

Nilanjan Chatterjee, Stephen J Chanock, Neil E Caporaso, 2009, BMC Medical Genetics.

Dubowitz Syndrome Is a Complex Comprised of Multiple, Genetically Distinct and Phenotypically Overlapping Disorders

Leslie G. Biesecker, Douglas R. Stewart, Meredith Yeager, 2014, PloS one.

Rare missense variants in POT1 predispose to familial cutaneous malignant melanoma

Jianxin Shi, Florence Demenais, Maria Teresa Landi, 2014, Nature Genetics.

Genome-wide Association Study Identifies Multiple Risk Loci for Chronic Lymphocytic Leukemia

Paolo Vineis, Theodore R Holford, Peter Kraft, 2013, Nature Genetics.

Meta-analysis identifies four new loci associated with testicular germ cell tumor

Nazneen Rahman, Fredrick R. Schumacher, Stephen J. Chanock, 2013, Nature Genetics.

Cigarette smoking, N-acetyltransferase genes and the risk of advanced colorectal adenoma.

Nilanjan Chatterjee, Timothy R Church, Meredith Yeager, 2006, Pharmacogenomics.

Caspase polymorphisms and genetic susceptibility to multiple myeloma

Nathaniel Rothman, Dalsu Baris, Robert Welch, 2008, Hematological oncology.

Analysis of Heritability and Shared Heritability Based on Genome-Wide Association Studies for 13 Cancer Types

Alison P. Klein, William Wheeler, Li Jin, 2015 .

DRD2 genetic variation in relation to smoking and obesity in the Prostate, Lung, Colorectal, and Ovarian Cancer Screening Trial

Nilanjan Chatterjee, Robert Welch, Stephen J Chanock, 2006, Pharmacogenetics and genomics.

Polymorphisms in pattern‐recognition genes in the innate immunity system and risk of non‐Hodgkin lymphoma

Theodore R Holford, Peter Boyle, Nathaniel Rothman, 2013, Environmental and molecular mutagenesis.

Common genetic polymorphisms modify the effect of smoking on absolute risk of bladder cancer.

Nilanjan Chatterjee, Jonine D Figueroa, Margaret R Karagas, 2013, Cancer research.

Seven prostate cancer susceptibility loci identified by a multi-stage genome-wide association study

Suzanne Chambers, Peter Kraft, Henrik Gronberg, 2011, Nature Genetics.

Efficient study design for next generation sequencing

Nilanjan Chatterjee, Stephen Chanock, Meredith Yeager, 2011, Genetic epidemiology.

Somatic sequence alterations in twenty-one genes selected by expression profile analysis of breast carcinomas

Charles M Perou, Vessela Kristensen, Stephen J Chanock, 2007, Breast Cancer Research.

Evolution of the mammalian MHC: natural selection, recombination, and convergent evolution

Meredith Yeager, A. Hughes, M. Yeager, 1999, Immunological reviews.

A Genome-Wide Scan Identifies Variants in NFIB Associated with Metastasis in Patients with Osteosarcoma.

David M. Thomas, Dina Halai, Sean Davis, 2015, Cancer discovery.

Genome-wide Association Study Identifies Two Susceptibility Loci for Osteosarcoma

David M. Thomas, Peter Kraft, Dina Halai, 2013, Nature Genetics.