Nidhi Shah

NCBI’s Virus Discovery Codeathon: Building “FIVE” —The Federated Index of Viral Experiments API Index

Michael Muchow, Robert A Edwards, Ward Deboutte, 2020, Viruses.

metagenomeFeatures: An R package for working with 16S rRNA reference databases and marker-gene survey feature data

Hector Corrada-Bravo, Joseph N. Paulson, Jayaram Kancherla, 2018 .

metagenomeFeatures: An R package for working with 16S rRNA reference databases and marker-gene survey feature data

Héctor Corrada Bravo, Joseph N. Paulson, Jayaram Kancherla, 2018, bioRxiv.

TIPP2: metagenomic taxonomic profiling using phylogenetic markers

Mihai Pop, Tandy J. Warnow, Erin K. Molloy, 2021, Bioinform..

A critical assessment of gene catalogs for metagenomic analysis

Mihai Pop, Jay Ghurye, Michael P. Cummings, 2021, Bioinform..

Misunderstood parameter of NCBI BLAST impacts the correctness of bioinformatics workflows

Mihai Pop, Tandy J. Warnow, Nidhi Shah, 2018, Bioinform..