Lude Franke

发表

Systems genetics analysis of obesity in a porcine model using WISH network method

Juha Karjalainen, Merete Fredholm, Sameer D. Pant, 2014 .

A strategy to search for common obesity and type 2 diabetes genes

Cisca Wijmenga, Lude Franke, N. Charlotte Onland-Moret, 2007, Trends in Endocrinology & Metabolism.

Integration of multi-omics data and deep phenotyping enables prediction of cytokine responses

Martin Jaeger, Cisca Wijmenga, Irma Joosten, 2018, Nature Immunology.

TEAM: a tool for the integration of expression, and linkage and association maps

Harm van Bakel, Cisca Wijmenga, Begoña Diosdado, 2004, European Journal of Human Genetics.

Causal relationships among the gut microbiome, short-chain fatty acids and metabolic diseases

Jingyuan Fu, Mark I. McCarthy, Anubha Mahajan, 2019, Nature Genetics.

Trans-eQTLs Reveal That Independent Genetic Variants Associated with a Complex Phenotype Converge on Intermediate Genes, with a Major Role for the HLA

Jingyuan Fu, Ritsert C. Jansen, Cisca Wijmenga, 2011, PLoS genetics.

Correction: Corrigendum: Novel loci affecting iron homeostasis and their effects in individuals at risk for hemochromatosis

Christian Gieger, Thomas Meitinger, Andres Metspalu, 2015, Nature Communications.

Blood pressure loci identified with a gene-centric array.

Jean Tichet, Tom R. Gaunt, Jackie A Cooper, 2011, American journal of human genetics.

Trans-ancestry genome-wide association study identifies 12 genetic loci influencing blood pressure and implicates a role for DNA methylation

Jing He, Christian Gieger, Wei Huang, 2015, Nature Genetics.

Genome-Wide Association Study Identifies Novel Loci Associated with Circulating Phospho- and Sphingolipid Concentrations

Yurii S. Aulchenko, Thomas Meitinger, Ritsert C. Jansen, 2012, PLoS genetics.

Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47

Tariq Ahmad, Katherine I. Morley, Vibeke Andersen, 2011, Nature Genetics.

Additional file 4: Table S4. of GAVIN: Gene-Aware Variant INterpretation for medical sequencing

K. van der Velde, Eddy N. de Boer, Cleo C. van Diemen, 2017 .

Wnt signaling and Dupuytren's disease.

Peter Nürnberg, Andre Franke, Cisca Wijmenga, 2011, The New England journal of medicine.

GAVIN: Gene-Aware Variant INterpretation for medical sequencing

Birgit Sikkema-Raddatz, Kristin M. Abbott, Alain Knopperts, 2017, Genome Biology.

Improving the diagnostic yield of exome- sequencing by predicting gene–phenotype associations using large-scale gene expression analysis

Birgit Sikkema-Raddatz, Kristin M. Abbott, Morris A. Swertz, 2018, Nature Communications.

52 Genetic Loci Influencing Myocardial Mass.

Christian Gieger, Thomas Meitinger, Manolis Kellis, 2016, Journal of the American College of Cardiology.

Myosin IXB variant increases the risk of celiac disease and points toward a primary intestinal barrier defect

Cisca Wijmenga, Begoña Diosdado, Eric Strengman, 2005, Nature Genetics.

Analysis of SNPs with an effect on gene expression identifies UBE2L3 and BCL3 as potential new risk genes for Crohn's disease.

Cisca Wijmenga, Lude Franke, Pieter Zanen, 2010, Human molecular genetics.

Gut microbiota composition and functional changes in inflammatory bowel disease and irritable bowel syndrome

Morris A. Swertz, Jingyuan Fu, Xiaofang Jiang, 2018, Science Translational Medicine.

Gene-Network Analysis Identifies Susceptibility Genes Related to Glycobiology in Autism

Cisca Wijmenga, Roel A. Ophoff, Martin Poot, 2009, PloS one.

Newly identified genetic risk variants for celiac disease related to the immune response

David S Sanders, Rhian Gwilliam, Cisca Wijmenga, 2008, Nature Genetics.

Inter-individual variability and genetic influences on cytokine responses to bacteria and fungi

Martin Jaeger, Morris A Swertz, Cisca Wijmenga, 2016, Nature Medicine.

Population-based metagenomics analysis reveals markers for gut microbiome composition and diversity

Morris A. Swertz, Jingyuan Fu, Yurii S. Aulchenko, 2016, Science.

Additional file 3: Table S3. of GAVIN: Gene-Aware Variant INterpretation for medical sequencing

K. van der Velde, Eddy N. de Boer, Cleo C. van Diemen, 2017 .

Disease variants alter transcription factor levels and methylation of their binding sites

Mathieu Lemire, Morris A. Swertz, Szymon M. Kielbasa, 2015, bioRxiv.

eQTL analysis in humans.

Lude Franke, Ritsert C Jansen, R. Jansen, 2009, Methods in molecular biology.

Improving the diagnostic yield of exome- sequencing by predicting gene–phenotype associations using large-scale gene expression analysis

Birgit Sikkema-Raddatz, Morris A Swertz, Yvonne J Vos, 2019, Nature Communications.

Proton pump inhibitors affect the gut microbiome

Jingyuan Fu, Zlatan Mujagic, Cisca Wijmenga, 2015, Gut.