Olli Yli-Harja

发表

Mathematical Modeling in Systems Biology

Jari Yli-Hietanen, Frank Emmert-Streib, Olli Yli-Harja, 2016, WIVACE.

Stochastic sequence-level model of coupled transcription and translation in prokaryotes

Olli Yli-Harja, Andre S. Ribeiro, Jarno Mäkelä, 2011, BMC Bioinformatics.

Data-driven multiscale modeling reveals the role of metabolic coupling for the spatio-temporal growth dynamics of yeast colonies

Nicholas S. Flann, Olli Yli-Harja, Alexander Skupin, 2018, bioRxiv.

Effects of multimerization on the temporal variability of protein complex abundance

Antti Häkkinen, Olli Yli-Harja, Brian Ingalls, 2013, BMC Systems Biology.

The Need for Formally Defining “Modern Medicine” by Means of Experimental Design

Frank Emmert-Streib, Olli Yli-Harja, Lauri Tuomisto, 2016, Front. Genet..

Correlation properties of cascaded recursive median filters

Olli Yli-Harja, J. Andrew Bangham, Richard Harvey, 1999, NSIP.

Determining noisy attractors of delayed stochastic gene regulatory networks from multiple data sources

Olli Yli-Harja, Andre S. Ribeiro, Xiaofeng Dai, 2009, Bioinform..

Automatic detection of changes in the dynamics of delayed stochastic gene networks and in vivo production of RNA molecules in Escherichia coli

Heikki Huttunen, Olli Yli-Harja, Meenakshisundaram Kandhavelu, 2011, Bioinform..

Finding large domains of similarly expressed genes. A novel method using the MDL principle and the recursive segmentation procedure.

Jaakko Astola, Olli Yli-Harja, Daniel Nicorici, 2006, IEEE engineering in medicine and biology magazine : the quarterly magazine of the Engineering in Medicine & Biology Society.

Evolutionary Dynamics of a Population of Cells with a Toxin Suppressor Gene

Antti Häkkinen, Olli Yli-Harja, Andre S. Ribeiro, 2011, Trans. Comp. Sys. Biology.

On Learning Gene Regulatory Networks Under the Boolean Network Model

Ilya Shmulevich, Olli Yli-Harja, Harri Lähdesmäki, 2003, Machine Learning.

Computational Analysis of the structural properties of Economic and Financial Networks

Matthias Dehmer, Olli Yli-Harja, Herbert Jodlbauer, 2017, 1710.04455.

A review of connectivity map and computational approaches in pharmacogenomics

Laleh Soltan Ghoraie, Benjamin Haibe-Kains, Matthias Dehmer, 2017, Briefings Bioinform..

Modeling single neuron behavior using stochastic differential equations

Olli Yli-Harja, Marja-Leena Linne, Antti Saarinen, 2006, Neurocomputing.

Output Distributions of Stack Filters Using Ordered Binary Decision Diagrams

Karen O. Egiazarian, Ilya Shmulevich, Olli Yli-Harja, 2000 .

Combining deep learning with token selection for patient phenotyping from electronic health records

Zhen Yang, Matthias Dehmer, Olli Yli-Harja, 2020, Scientific Reports.

Analysis and Visualization of Gene Expression Microarray Data in Human Cancer Using Self-Organizing Maps

Jaakko Astola, Sampsa Hautaniemi, Olli Yli-Harja, 2003, Machine Learning.

Real-time observation of bacterial gene expression noise

Olli Yli-Harja, Meenakshisundaram Kandhavelu, Olga Anufrieva, 2016, Nano Commun. Networks.

A strategy for identifying putative causes of gene expression variation in human cancers

Jaakko Astola, Sampsa Hautaniemi, Olli Yli-Harja, 2004, J. Frankl. Inst..

Efficient automated method for image-based classification of microbial cells

Pekka Ruusuvuori, Olli Yli-Harja, Jenni Seppälä, 2008, 2008 19th International Conference on Pattern Recognition.

Graph cut and image intensity-based splitting improves nuclei segmentation in high-content screening

Pekka Ruusuvuori, Pauli Rämö, Olli Yli-Harja, 2013, Electronic Imaging.

Open Access Research Article Evaluation of Methods for Detection of Fluorescence Labeled Subcellular Objects in Microscope Images

Pekka Ruusuvuori, Olli Yli-Harja, Aimée M. Dudley, 2022 .

Systems Pharmacogenomic Landscape of Drug Similarities from LINCS data: Drug Association Networks

Olli Yli-Harja, Shailesh Tripathi, Matthias Dehmer, 2019, Scientific Reports.

Modeling bioprocess scale-up utilizing regularized linear and logistic regression

Olli Yli-Harja, Antti Larjo, Tommi Aho, 2013, 2013 IEEE International Workshop on Machine Learning for Signal Processing (MLSP).

A Beta-mixture model for dimensionality reduction, sample classification and analysis

Carsten Wiuf, Olli Yli-Harja, Philippe Lamy, 2011, BMC Bioinformatics.

CGH-Plotter: MATLAB toolbox for CGH-data analysis

Jaakko Astola, Sampsa Hautaniemi, Olli Yli-Harja, 2003, Bioinform..

NanoMiner workflow diagram.

Bengt Fadeel, Riitta Lahesmaa, Olli Yli-Harja, 2013 .

Explainable artificial intelligence and machine learning: A reality rooted perspective

Matthias Dehmer, Frank Emmert-Streib, Olli Yli-Harja, 2020, WIREs Data Mining Knowl. Discov..

sBGMM: A Stratified Beta-Gaussian Mixture Model for Clustering Genes with Multiple Data Sources

Olli Yli-Harja, Harri Lähdesmäki, Xiaofeng Dai, 2008, 2008 International Conference on Biocomputation, Bioinformatics, and Biomedical Technologies.

Calibration-free methods in segmentation of cDNA microarray images

Olli Yli-Harja, Mikko Tiainen, Petri Vesanen, 2002, IS&T/SPIE Electronic Imaging.

Artificial Intelligence: A Clarification of Misconceptions, Myths and Desired Status

Matthias Dehmer, Frank Emmert-Streib, Olli Yli-Harja, 2020, Frontiers in Artificial Intelligence.

Graph-based exploitation of gene ontology using GOxploreR for scrutinizing biological significance

Frank Emmert-Streib, Olli Yli-Harja, Shailesh Tripathi, 2020, Scientific Reports.

Towards the experimental evaluation of novel supervised fuzzy adaptive resonance theory for pattern classification

Olli Yli-Harja, Nikhil, Alireza Akhbardeh, 2008, Pattern Recognit. Lett..

Analysis of the properties of median and weighted median filters using threshold logic and stack filter representation

Jaakko Astola, Yrjö Neuvo, Olli Yli-Harja, 1991, IEEE Trans. Signal Process..

Synthetic Images of High-Throughput Microscopy for Validation of Image Analysis Methods

Pekka Ruusuvuori, Olli Yli-Harja, Antti Lehmussola, 2008, Proceedings of the IEEE.

Sparse logistic regression and polynomial modelling for detection of artificial drainage networks

Heikki Huttunen, Kaisa Liimatainen, Pekka Ruusuvuori, 2015 .

Output distributions of recursive stack filters

Jaakko Astola, Karen O. Egiazarian, Ilya Shmulevich, 1999, IEEE Signal Processing Letters.

Multi-scale Gaussian representation and outline-learning based cell image segmentation

Pekka Ruusuvuori, Pauli Rämö, Olli Yli-Harja, 2013, BMC Bioinformatics.

Pattern Processing in Music Analysis and Creation

Edward J. Coyle, Dirk-Jan Povel, Geraint A. Wiggins, 2001 .

Evaluating the performance of microarray segmentation algorithms

Pekka Ruusuvuori, Olli Yli-Harja, Antti Lehmussola, 2006, Bioinform..

Characterization of aberrant pathways across human cancers

Olli Yli-Harja, Matti Nykter, Wei Zhang, 2013, BMC Systems Biology.

Estimation and inversion of the effects of cell population asynchrony in gene expression time-series

Heikki Huttunen, Ronald K. Pearson, Olli Yli-Harja, 2003, Signal Process..

Robust regression for periodicity detection in non-uniformly sampled time-course gene expression data

Ilya Shmulevich, Olli Yli-Harja, Harri Lähdesmäki, 2007, BMC Bioinformatics.

In vivo kinetics of transcription initiation of the lar promoter in Escherichia coli. Evidence for a sequential mechanism with two rate-limiting steps

Antti Häkkinen, Olli Yli-Harja, Meenakshisundaram Kandhavelu, 2011, BMC Systems Biology.

Reduction factors in finite automata with application to nonlinear filters

Pertti Koivisto, Antti Valmari, Ilya Shmulevich, 2000, 2000 10th European Signal Processing Conference.

Graph-based smoothing of class data with applications in musical key finding

Ilya Shmulevich, Olli Yli-Harja, Kjell Lemström, 1999, NSIP.

Against Dataism and for Data Sharing of Big Biomedical and Clinical Data with Research Parasites

Matthias Dehmer, Frank Emmert-Streib, Olli Yli-Harja, 2016, Front. Genet..

BMC Bioinformatics BioMed Central Methodology article

Ronald K. Pearson, Olli Yli-Harja, Harri Lähdesmäki, 2005 .

Simulation tools for biochemical networks: evaluation of performance and usability

Olli Yli-Harja, Olli-Pekka Smolander, Tiina Manninen, 2005, Bioinform..

sgnesR: An R package for simulating gene expression data from an underlying real gene network structure considering delay parameters

Matthias Dehmer, Frank Emmert-Streib, Olli Yli-Harja, 2017, BMC Bioinformatics.

MULTILAYER NEURAL NETWORK BASED ON MULTI-VALUED NEURONS (MLMVN) APPLIED TO CLASSIFICATION OF MICRORARRAY GENE EXPRESSION DATA

Jaakko Astola, Pekka Ruusuvuori, Igor N. Aizenberg, 2006 .

RMBNToolbox: random models for biochemical networks

Olli Yli-Harja, Jari Niemi, Olli-Pekka Smolander, 2007, BMC Systems Biology.

ZebIAT, an image analysis tool for registering zebrafish embryos and quantifying cancer metastasis

Olli Yli-Harja, Andre S. Ribeiro, Teppo Annila, 2013, BMC Bioinformatics.

Information Diversity in Structure and Dynamics of Simulated Neuronal Networks

Matti Nykter, Olli Yli-Harja, Keijo Ruohonen, 2011, Front. Comput. Neurosci..

Novel Data Fusion Method and Exploration of Multiple Information Sources for Transcription Factor Target Gene Prediction

Olli Yli-Harja, Harri Lähdesmäki, Xiaofeng Dai, 2010, EURASIP J. Adv. Signal Process..

Robust quantification of in vitro angiogenesis through image analysis

Ilya Shmulevich, Olli Yli-Harja, Antti Niemistö, 2005, IEEE Transactions on Medical Imaging.

Predictive Clustering Hybrid Regression(pCHR) Approach and Its Application to Sucrose-Based Biohydrogen Production

Ari Visa, Olli Yli-Harja, Nikhil, 2008 .

Software for quantification of labeled bacteria from digital microscope images by automated image analysis.

Olli Yli-Harja, Jenni Seppälä, Jyrki Selinummi, 2005, BioTechniques.

Computational Methods for Estimation of Cell Cycle Phase Distributions of Yeast Cells

Matti Nykter, Pekka Ruusuvuori, Olli Yli-Harja, 2007, EURASIP J. Bioinform. Syst. Biol..

Simplified implementation of the recursive median sieve

Gavin C. Cawley, Pertti Koivisto, Ilya Shmulevich, 2001, Signal Process..

In silico microdissection of microarray data from heterogeneous cell populations

Ilya Shmulevich, Olli Yli-Harja, Wei Zhang, 2005, BMC Bioinformatics.

Mapping dynamical states to structural classes for Boolean networks using a classification algorithm

Septimia Sarbu, Ilya Shmulevich, Olli Yli-Harja, 2015, 2015 23rd European Signal Processing Conference (EUSIPCO).

A novel strategy for microarray quality control using Bayesian networks

Jaakko Astola, Sampsa Hautaniemi, Olli Yli-Harja, 2003, Bioinform..

Inference of Kinetic Parameters of Delayed Stochastic Models of Gene Expression Using a Markov Chain Approximation

Olli Yli-Harja, Andre S. Ribeiro, Henrik Mannerström, 2010, EURASIP J. Bioinform. Syst. Biol..

Benchmark set of synthetic images for validating cell image analysis algorithms

Pekka Ruusuvuori, Olli Yli-Harja, Heikki Huttunen, 2008, 2008 16th European Signal Processing Conference.

Inference of Genetic Regulatory Networks via Best-Fit Extensions

Jaakko Astola, Ilya Shmulevich, Olli Yli-Harja, 2003 .

Diversity of temporal correlations between genes in models of noisy and noiseless gene networks

Olli Yli-Harja, Andre S. Ribeiro, Jason Lloyd-Price, 2011, Biosyst..

Structure-Dynamics Relationships in Biological Networks

Matti Nykter, Ilya Shmulevich, Olli Yli-Harja, 2011 .

Delayed Stochastic Model of Transcription at the Single Nucleotide Level

Antti Häkkinen, Olli Yli-Harja, Andre S. Ribeiro, 2009, J. Comput. Biol..

A joint finite mixture model for clustering genes from independent Gaussian and beta distributed data

Olli Yli-Harja, Harri Lähdesmäki, Xiaofeng Dai, 2009, BMC Bioinformatics.

Identifying underlying factors in breast cancer using independent component analysis

Sanjit K. Mitra, Jaakko Astola, Sampsa Hautaniemi, 2003, 2003 IEEE XIII Workshop on Neural Networks for Signal Processing (IEEE Cat. No.03TH8718).

Cancer research in the era of next-generation sequencing and big data calls for intelligent modeling

Jari Yli-Hietanen, Olli Yli-Harja, Antti Ylipää, 2015, Chinese journal of cancer.

Local entropy estimation in particle velocity images using histogram deconvolution

Heikki Huttunen, Heimo Ihalainen, Olli Yli-Harja, 2002, IS&T/SPIE Electronic Imaging.

Localized Key Finding: Algorithms and Applications

Ilya Shmulevich, Olli Yli-Harja, I. Shmulevich, 2000 .

Identification of feasible pathway information for c-di-GMP binding proteins in cellulose production

Olli Yli-Harja, Tommi Aho, Rahul Mangayil, 2017, ArXiv.

Statistical characterization of detail preservation

Heikki Huttunen, Olli Yli-Harja, Antti Niemistö, 2003, IS&T/SPIE Electronic Imaging.

An Artificial Neural Network Based Model for Predicting H2 Production Rates in a Sucrose-Based Bioreactor System

Ari Visa, Olli Yli-Harja, Nikhil, 2008 .

Critical networks exhibit maximal information diversity in structure-dynamics relationships.

Ilya Shmulevich, Olli Yli-Harja, Matti Nykter, 2008, Physical review letters.

Stochastic Differential Equation Model for Cerebellar Granule Cell Excitability

Olli Yli-Harja, Marja-Leena Linne, Antti Saarinen, 2008, PLoS Comput. Biol..

Computational Framework for Simulating Fluorescence Microscope Images With Cell Populations

Pekka Ruusuvuori, Olli Yli-Harja, Heikki Huttunen, 2007, IEEE Transactions on Medical Imaging.

Correction of Misclassifications Using a Proximity-Based Estimation Method

Vladimir V. Lukin, Ilya Shmulevich, Olli Yli-Harja, 2004, EURASIP J. Adv. Signal Process..

Simulation of microarray data with realistic characteristics

Matti Nykter, Pekka Ruusuvuori, Olli Yli-Harja, 2006, BMC Bioinformatics.

Comparison of automated parameter estimation methods for neuronal signaling networks

Olli Yli-Harja, Marja-Leena Linne, Antti Pettinen, 2006, Neurocomputing.

Relationships between probabilistic Boolean networks and dynamic Bayesian networks as models of gene regulatory networks

Ilya Shmulevich, Sampsa Hautaniemi, Olli Yli-Harja, 2006, Signal Process..

Information propagation within the Genetic Network of Saccharomyces cerevisiae

Olli Yli-Harja, Andre S. Ribeiro, Timothy R. Hughes, 2010, BMC Systems Biology.

Cell segmentation by multi-resolution analysis and maximum likelihood estimation (MAMLE)

Olli Yli-Harja, Meenakshisundaram Kandhavelu, Andre S. Ribeiro, 2013, BMC Bioinformatics.

Estimation of population effects in synchronized budding yeast experiments

Olli Yli-Harja, Antti Niemistö, Mikko Tiainen, 2003, IS&T/SPIE Electronic Imaging.

Breakdown probabilities of recursive stack filters

Pertti Koivisto, Ilya Shmulevich, Olli Yli-Harja, 2001, Signal Process..

Exploring subjective image quality through isopreference curves

Pekka Ruusuvuori, Olli Yli-Harja, Antti Lehmussola, 2005, IEEE International Conference on Image Processing 2005.

Ensuring Quality Standards and Reproducible Research for Data Analysis Services in Oncology: A Cooperative Service Model

Matthias Dehmer, Frank Emmert-Streib, Olli Yli-Harja, 2019, Front. Cell Dev. Biol..

RF-ACE for uncovering nonlinear associations from heterogeneous cancer data

Ilya Shmulevich, Olli Yli-Harja, Harri Lähdesmäki, 2011 .

A review of connectivity map and computational approaches in pharmacogenomics

Laleh Soltan Ghoraie, Benjamin Haibe-Kains, Matthias Dehmer, 2017, Briefings Bioinform..

Sequence Dependent Properties of the Expression Dynamics of Genes and Gene Networks

Olli Yli-Harja, Andre S. Ribeiro, Jarno Mäkelä, 2012, CMSB.

Effects of Transcriptional Pausing on Gene Expression Dynamics

Antti Häkkinen, Olli Yli-Harja, Andre S. Ribeiro, 2010, PLoS Comput. Biol..

On the robustness of the class of stack filters

Jaakko Astola, Ilya Shmulevich, Olli Yli-Harja, 2002, IEEE Trans. Signal Process..

A clarification of misconceptions, myths and desired status of artificial intelligence pdf

Matthias Dehmer, Frank Emmert-Streib, Olli Yli-Harja, 2020, ArXiv.

A protein–protein interaction guided method for competitive transcription factor binding improves target predictions

Olli Yli-Harja, Harri Lähdesmäki, Kirsti Laurila, 2009, Nucleic acids research.

Effects of the promoter open complex formation on gene expression dynamics.

Antti Häkkinen, Olli Yli-Harja, Henrik Mannerström, 2010, Physical review. E, Statistical, nonlinear, and soft matter physics.

Dynamics of transcription driven by the tetA promoter, one event at a time, in live Escherichia coli cells

Olli Yli-Harja, Meenakshisundaram Kandhavelu, Andre S. Ribeiro, 2012, Nucleic acids research.

In vivo single-molecule kinetics of activation and subsequent activity of the arabinose promoter

Olli Yli-Harja, Meenakshisundaram Kandhavelu, Andre S. Ribeiro, 2013, Nucleic acids research.

Tuning cell differentiation patterns and single cell dynamics by regulating proteins' functionalities in a toggle switch.

Olli Yli-Harja, Xiaofeng Dai, O. Yli-Harja, 2009, Journal of theoretical biology.

A METHOD FOR CALCULATING BREAKDOWN PROBABILITIES OF RECURSIVE STACK FILTERS BASED ON MARKOV CHAIN MODELS

Pertti Koivisto, Ilya Shmulevich, Olli Yli-Harja, 1999 .

Cell-to-cell diversity in protein levels of a gene driven by a tetracycline inducible promoter

Olli Yli-Harja, Meenakshisundaram Kandhavelu, Henrik Mannerström, 2011, BMC Molecular Biology.

Iterated maps for annealed Boolean networks.

Pauli Rämö, Olli Yli-Harja, Juha Kesseli, 2006, Physical review. E, Statistical, nonlinear, and soft matter physics.

Of the complexity of Boolean network state trajectories

Olli Yli-Harja, Matti Nykter, Tuomo Mäki-Marttunen, 2011 .

Transcriptional profiling reflects shared and unique characters for CD34+ and CD133+ cells.

Sampsa Hautaniemi, Olli Yli-Harja, Jari Niemi, 2006, Stem cells and development.

Analysis of signaling pathways in 90 cancer cell lines by protein lysate array.

Ioan Tabus, Olli Yli-Harja, Wei Zhang, 2007, Journal of proteome research.

Dissection of Signaling Pathways in Fourteen Breast Cancer Cell Lines Using Reverse-Phase Protein Lysate Microarray

Ioan Tabus, Olli Yli-Harja, Andrea Hategan, 2006, Technology in cancer research & treatment.

NanoMiner — Integrative Human Transcriptomics Data Resource for Nanoparticle Research

Riitta Lahesmaa, Olli Yli-Harja, Bengt Fadeel, 2013, PloS one.

ACTIVE LEARNING OF BAYESIAN NETWORK STRUCTURE IN A REALISTIC SETTING

Ilya Shmulevich, Olli Yli-Harja, Antti Larjo, 2008 .

Reconstruction and Validation of RefRec: A Global Model for the Yeast Molecular Interaction Network

Pekka Ruusuvuori, Olli Yli-Harja, Christophe Roos, 2010, PloS one.

Robustness of the division symmetry in Escherichia coli and functional consequences of symmetry breaking

Olli Yli-Harja, Abhishekh Gupta, Jason Lloyd-Price, 2014, Physical biology.

Application of the Clustering Hybrid Regression Approach to Model Xylose-Based Fermentative Hydrogen Production

Ari Visa, Olli Yli-Harja, Jaakko A. Puhakka, 2008 .

Quantifying local structure effects in network dynamics.

Antti Häkkinen, Olli Yli-Harja, Jason Lloyd-Price, 2008, Physical review. E, Statistical, nonlinear, and soft matter physics.

Distribution estimation of synchronized budding yeast population

Pekka Ruusuvuori, Olli Yli-Harja, Antti Niemistö, 2004 .

ANALYZING DYNAMICS OF BOOLEAN NETWORKS WITH CANALYZING FUNCTIONS USING SPECTRAL METHODS

Olli Yli-Harja, Juha Kesseli, O. Yli-Harja, 2005 .

Statistical properties of median, weighted median and stack filters

Jaakko Astola, Olli Yli-Harja, Yrjö Neuvo, 1989 .

Asymmetric Disposal of Individual Protein Aggregates in Escherichia coli, One Aggregate at a Time

Antti Häkkinen, Olli Yli-Harja, Meenakshisundaram Kandhavelu, 2012, Journal of bacteriology.

Bright Field Microscopy as an Alternative to Whole Cell Fluorescence in Automated Analysis of Macrophage Images

Pekka Ruusuvuori, Ilya Shmulevich, Olli Yli-Harja, 2009, PloS one.

Tracking perturbations in Boolean networks with spectral methods.

Pauli Rämö, Olli Yli-Harja, Juha Kesseli, 2005, Physical review. E, Statistical, nonlinear, and soft matter physics.

Cancer systems biology: signal processing for cancer research

Olli Yli-Harja, Matti Nykter, Wei Zhang, 2011, Chinese journal of cancer.

Unsupervised Analysis Uncovers Changes in Histopathologic Diagnosis in Supervised Genomic Studies

Ilya Shmulevich, Olli Yli-Harja, Matti Nykter, 2006, Technology in cancer research & treatment.

Quantification of vesicles in differentiating human SH-SY5Y neuroblastoma cells by automated image analysis

Olli Yli-Harja, Antti Niemistö, Marja-Leena Linne, 2006, Neuroscience Letters.

Clustering hybrid regression: a novel computational approach to study and model biohydrogen production through dark fermentation

Ari Visa, Olli Yli-Harja, Anna H. Kaksonen, 2008, Bioprocess and biosystems engineering.

Distinguishing key biological pathways between primary breast cancers and their lymph node metastases by gene function-based clustering analysis.

Wei Zhang, Ilya Shmulevich, Olli Yli-Harja, 2004, International journal of oncology.

Effects of Rate-Limiting Steps in Transcription Initiation on Genetic Filter Motifs

Antti Häkkinen, Olli Yli-Harja, Andre S. Ribeiro, 2013, PloS one.

Differential gene expression in non‐malignant tumour microenvironment is associated with outcome in follicular lymphoma patients treated with rituximab and CHOP

Sampsa Hautaniemi, Olli Yli-Harja, Matti Nykter, 2006, British journal of haematology.

Quantification of in vitro cell invasion through image analysis

Olli Yli-Harja, Wei Zhang, Limei Hu, 2004, The 26th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

Probabilistic RNA partitioning generates transient increases in the normalized variance of RNA numbers in synchronized populations of Escherichia coli.

Olli Yli-Harja, Meenakshisundaram Kandhavelu, Jason Lloyd-Price, 2012, Molecular bioSystems.

Regulation of mean and noise of the in vivo kinetics of transcription under the control of the lac/ara‐1 promoter

Olli Yli-Harja, Meenakshisundaram Kandhavelu, Abhishekh Gupta, 2012, FEBS letters.