Daniel B. Martin

发表

Transient Stability Test Systems for Direct Stability Methods

Vijay Vittal, F. E. Villaseca, F. Eugenio Villaseca, 1992 .

Computational prediction of proteotypic peptides for quantitative proteomics

Daniel B. Martin, R. Aebersold, B. Kuster, 2007, Nature Biotechnology.

Tandem mass spectrometry database searching

Ruedi Aebersold, Jimmy K. Eng, Daniel B. Martin, 2005 .

Advances in quantitative proteomics using stable isotope tags.

Daniel B. Martin, R. Aebersold, T. Griffin, 2002, Trends in biotechnology.

A guided tour of the Trans‐Proteomic Pipeline

Natalie I. Tasman, David D. Shteynberg, Daniel B. Martin, 2010, Proteomics.

Circulating microRNAs as stable blood-based markers for cancer detection

Daniel B. Martin, R. Gentleman, P. Nelson, 2008, Proceedings of the National Academy of Sciences.

MRMer, an Interactive Open Source and Cross-platform System for Data Extraction and Visualization of Multiple Reaction Monitoring Experiments*S⃞

Damon May, Daniel B. Martin, Ted Holzman, 2008, Molecular & Cellular Proteomics.

DirecTag: accurate sequence tags from peptide MS/MS through statistical scoring.

David L Tabb, Matthew C Chambers, Amy-Joan L Ham, 2008, Journal of proteome research.

Collision energy optimization of b- and y-ions for multiple reaction monitoring mass spectrometry.

Daniel B. Martin, Philip R. Gafken, P. Gafken, 2011, Journal of proteome research.

Rapid optimization of MRM-MS instrument parameters by subtle alteration of precursor and product m/z targets.

Hamid Mirzaei, Daniel B Martin, Daniel B. Martin, 2009, Journal of proteome research.

Correlation between y-type ions observed in ion trap and triple quadrupole mass spectrometers.

Olga Vitek, Daniel B Martin, Daniel B. Martin, 2009, Journal of proteome research.

Proteomic analyses using Grifola frondosa metalloendoprotease Lys-N.

David D. Shteynberg, Daniel B. Martin, J. Eng, 2009, Journal of proteome research.

Analysis of RP-HPLC loading conditions for maximizing peptide identifications in shotgun proteomics.

Daniel B. Martin, J. Eng, Amelia C. Peterson, 2009, Journal of proteome research.

Proteomic analysis of the androgen receptor via MS‐compatible purification of biotinylated protein on streptavidin resin

Daniel B. Martin, C. Holstein, N. Josephson, 2012, Proteomics.

Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry

Ruedi Aebersold, Daniel B. Martin, R. Aebersold, 2003, Nature Biotechnology.

Tumorigenesis and Neoplastic Progression Regulation of Hepatocyte Activator Inhibitor-1 Expression by Androgen and Oncogenic Transformation in the Prostate

Daniel B. Martin, S. Falcon, P. Nelson, 2005 .

Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas

Alexey I Nesvizhskii, Brian Raught, Ruedi Aebersold, 2006, Genome Biology.

SILAC compatible strain of Pichia pastoris for expression of isotopically labeled protein standards and quantitative proteomics.

Daniel B. Martin, R. Kuestner, K. Madden, 2011, Journal of proteome research.

The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools.

Ruedi Aebersold, Jimmy K Eng, Parag Mallick, 2008, Journal of proteome research.

MaRiMba: a software application for spectral library-based MRM transition list assembly.

Luis Mendoza, Ruedi Aebersold, Eric W Deutsch, 2009, Journal of proteome research.

Assessing Bias in Experiment Design for Large Scale Mass Spectrometry-based Quantitative Proteomics*S

Benno Schwikowski, Heidi Zhang, Ruedi Aebersold, 2007, Molecular & Cellular Proteomics.

Quantitative Proteomic Analysis of Proteins Released by Neoplastic Prostate Epithelium

Daniel B. Martin, P. Nelson, D. Goodlett, 2004, Cancer Research.

Integrative Proteomic Analysis of Serum and Peritoneal Fluids Helps Identify Proteins that Are Up-Regulated in Serum of Women with Ovarian Cancer

Daniel B. Martin, M. McIntosh, C. Drescher, 2010, PloS one.

Integrative analysis of N-linked human glycoproteomic data sets reveals PTPRF ectodomain as a novel plasma biomarker candidate for prostate cancer.

Daniel B. Martin, P. Nelson, T. Holzman, 2012, Journal of proteome research.

Investigation of neutral loss during collision-induced dissociation of peptide ions.

Alexey I Nesvizhskii, Ruedi Aebersold, Jimmy K Eng, 2005, Analytical chemistry.

Quantification of the compositional information provided by immonium ions on a quadrupole-time-of-flight mass spectrometer.

Olga Vitek, Jimmy K Eng, Daniel B Martin, 2008, Analytical chemistry.

Circulating microRNAs as stable blood-based markers for cancer detection

Daniel B. Martin, R. Gentleman, P. Nelson, 2008, Proceedings of the National Academy of Sciences.

Fast parallel tandem mass spectral library searching using GPU hardware acceleration.

Daniel B. Martin, Henry H. N. Lam, J. Eng, 2011, Journal of Proteome Research.

Proteomic analyses using Grifola frondosa metalloendoprotease Lys-N.

David D. Shteynberg, Daniel B. Martin, J. Eng, 2009, Journal of proteome research.