Fátima Al-Shahrour

发表

Proposal of a New Bioinformatics Pipeline for Metataxonomics in Precision Medicine

Florentino Fernández Riverola, Osvaldo Graña-Castro, Hugo López-Fernández, 2019, PACBB.

The role of the environment in Parkinson's disease.

Joaquín Dopazo, Ignacio Medina, Joaquín Tárraga, 1996, Nucleic Acids Res..

Next station in microarray data analysis: GEPAS

Joaquín Dopazo, Joaquín Tárraga, Javier Herrero, 2006, Nucleic Acids Res..

Ultrasome: efficient aberration caller for copy number studies of ultra-high resolution

Anne E Carpenter, Anne E. Carpenter, Fátima Al-Shahrour, 2009, Bioinform..

Discovering molecular functions significantly related to phenotypes by combining gene expression data and biological information

Joaquín Dopazo, Ramón Díaz-Uriarte, Fátima Al-Shahrour, 2005, Bioinform..

FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes

Joaquín Dopazo, Ramón Díaz-Uriarte, Fátima Al-Shahrour, 2004, Bioinform..

From genes to functional classes in the study of biological systems

Joaquín Dopazo, Fátima Al-Shahrour, David Montaner, 2007, BMC Bioinformatics.

Using gene ontology on genome-scale studies to find significant associations of biologically relevant terms to groups of genes

Joaquín Dopazo, Ramón Díaz-Uriarte, Javier Herrero, 2003, 2003 IEEE XIII Workshop on Neural Networks for Signal Processing (IEEE Cat. No.03TH8718).

ISACGH: a web-based environment for the analysis of Array CGH and gene expression which includes functional profiling

Joaquín Dopazo, Ignacio Medina, Joaquín Tárraga, 2007, Nucleic Acids Res..

PupaSNP Finder: a web tool for finding SNPs with putative effect at transcriptional level

Joaquín Dopazo, Fátima Al-Shahrour, Juan M. Vaquerizas, 2004, Nucleic Acids Res..

Precision medicine needs pioneering clinical bioinformaticians

Alfonso Valencia, Joaquín Dopazo, Juan C. Cigudosa, 2019, Briefings Bioinform..

Selection upon Genome Architecture: Conservation of Functional Neighborhoods with Changing Genes

Arcadi Navarro, Joaquín Dopazo, Fátima Al-Shahrour, 2010, PLoS Comput. Biol..

The AnnoLite and AnnoLyze programs for comparative annotation of protein structures

Marc A. Martí-Renom, Joaquín Dopazo, Ursula Pieper, 2007, BMC Bioinformatics.

DBAli tools: mining the protein structure space

Marc A. Martí-Renom, Joaquín Dopazo, Narayanan Eswar, 2007, Nucleic Acids Res..

The GEPAS pipeline

Javier Herrero, Ramón Díaz-Uriarte, Fátima Al-Shahrour, 2011 .

SNOW, a web-based tool for the statistical analysis of protein–protein interaction networks

Joaquín Dopazo, Stefan Götz, Fátima Al-Shahrour, 2009, Nucleic Acids Res..

GEPAS, a web-based tool for microarray data analysis and interpretation

Joaquín Dopazo, Ignacio Medina, Stefan Götz, 2008, Nucleic Acids Res..

Functional profiling of microarray experiments using text-mining derived bioentities

Joaquín Dopazo, Fátima Al-Shahrour, David Montaner, 2007, Bioinform..

GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data

Joaquín Dopazo, Ramón Díaz-Uriarte, Javier Herrero, 2005, Nucleic Acids Res..

vulcanSpot: a tool to prioritize therapeutic vulnerabilities in cancer

Elena Piñeiro-Yáñez, Alfonso Valencia, Tomás Di Domenico, 2019, Bioinform..

GEPAS: a web-based resource for microarray gene expression data analysis

Joaquín Dopazo, Ramón Díaz-Uriarte, Javier Herrero, 2003, Nucleic Acids Res..

BABELOMICS: a suite of web tools for functional annotation and analysis of groups of genes in high-throughput experiments

Joaquín Dopazo, Fátima Al-Shahrour, Pablo Minguez, 2005, Nucleic Acids Res..

Gene set-based analysis of polymorphisms: finding pathways or biological processes associated to traits in genome-wide association studies

Joaquín Dopazo, Ignacio Medina, Joaquín Tárraga, 2009, Nucleic Acids Res..

A comprehensive and centralized database for exploring omics data in Autoimmune Diseases

Joaquín Dopazo, Fátima Al-Shahrour, Daniel Toro-Domínguez, 2020 .

Finding SNPs with Putative Phenotypic Effect at Transcriptional Level

Joaquín Dopazo, Fátima Al-Shahrour, Juan M. Vaquerizas, 2004, Spanish Bioinformatics Conference.

Expression and microarrays.

Joaquín Dopazo, Fátima Al-Shahrour, J. Dopazo, 2008, Methods in molecular biology.

BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments

Joaquín Dopazo, Christian Blaschke, Joaquín Tárraga, 2006, Nucleic Acids Res..

New Trends in the Analysis of Functional Genomic Data

Fátima Al-Shahrour, David Montaner, Joaquin Dopazo, 2008 .

Babelomics: advanced functional profiling of transcriptomics, proteomics and genomics experiments

Joaquín Dopazo, Ignacio Medina, Stefan Götz, 2008, Nucleic Acids Res..

New Challenges in Gene Expression Data Analysis and the Extended GEPAS

Joaquín Dopazo, Ramón Díaz-Uriarte, Javier Herrero, 2004, Spanish Bioinformatics Conference.

A comprehensive database for integrated analysis of omics data in autoimmune diseases

Joaquín Dopazo, Fátima Al-Shahrour, Daniel Toro-Domínguez, 2021, BMC Bioinform..

CSVS, a crowdsourcing database of the Spanish population genetic variability

Carlos Loucera, Joaquín Dopazo, Aurora Pujol, 2020, Nucleic Acids Res..

DREIMT: a drug repositioning database and prioritization tool for immunomodulation

Fátima Al-Shahrour, Hugo López-Fernández, Miguel Reboiro-Jato, 2020, bioRxiv.

Pancreas Cancer Precision Treatment Using Avatar Mice from a Bioinformatics Perspective

Fátima Al-Shahrour, Manuel Hidalgo, Gonzalo Gómez-López, 2017, Public Health Genomics.

A molecular hypothesis to explain direct and inverse co-morbidities between Alzheimer’s Disease, Glioblastoma and Lung cancer

Alfonso Valencia, Anaïs Baudot, Martin Krallinger, 2017, Scientific Reports.

Exploring the antimicrobial action of a carbon monoxide-releasing compound through whole-genome transcription profiling of Escherichia coli.

Fátima Al-Shahrour, Joaquin Dopazo, J. Dopazo, 2009, Microbiology.

15 THE USE OF GO TERMS TO UNDERSTAND THE BIOLOGICAL SIGNIFICANCE OF MICROARRAY DIFFERENTIAL GENE EXPRESSION DATA

Joaquín Dopazo, Ramón Díaz-Uriarte, Fátima Al-Shahrour, 2003 .

Functional profiling and gene expression analysis of chromosomal copy number alterations

Joaquín Dopazo, Joaquín Tárraga, Fátima Al-Shahrour, 2007, Bioinformation.