Atsushi Doi

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Java RMI による Genomic Object Net の分散オブジェクト化(バイオエンジニアリングI)

Tomokazu Kono, Hironori Kitakaze, Masao Nagasaki, 2004 .

Knowledge Base for Power Plant Operation and its Application to Operation Guide

Atsushi Doi, Toshiaki Sakaguchi, 1986 .

Biopathways representation and simulation on hybrid functional Petri net

Atsushi Doi, Hiroshi Matsuno, Satoru Miyano, 2003, Silico Biol..

Activity Report on KOSEN Committee of Kanto Society for Engineering Education

Atsushi Doi, Kazuhito Furuya, 2013 .

Simulation-Based Validation of the p53 Transcriptional Activity with Hybrid Functional Petri Net

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2006, Silico Biol..

Unraveling Dynamic Activities of Autocrine Pathways that Control Drug-Response Transcriptome Networks

Deborah Sanders, Masao Nagasaki, Atsushi Doi, 2008, Pacific Symposium on Biocomputing.

Biopathway Model Conversion from E-CELL to Genomic Object Net

Atsushi Doi, Hiroshi Matsuno, Satoru Miyano, 2001 .

Foundations of Systems Biology - Using Cell Illustrator® and Pathway Databases

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2009, Computational Biology.

A New Educational Method to Acquire and Transfer Experience-based Wisdom for Power Engineers

Atsushi Doi, Sumie Kyomoto, 2008 .

Development of a Knowledge Based System for Voltage/Reactive Power Operation Planning

Atsushi Doi, Yoshiyuki Kono, Yuichi Omichi, 1990 .

Recreating Biopathway Databases towards Simulation

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2003, CMSB.

Genomic Object Net: XML Visualization of Simulation Results from Biological Modeling on Hybrid Functional Petri Net

Atsushi Doi, Hiroshi Matsuno, Satoru Miyano, 2001 .

Constructing biological pathway models with hybrid functional petri nets.

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2011, Studies in health technology and informatics.

Protein Dynamics Observations of Lambda Phage by Hybrid Petri Net

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 1999 .

Genomic Object Net in JAVA: A Platform for Biopathway Modeling and Simulation

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2002 .

Genomic data assimilation for estimating hybrid functional Petri net from time-course gene expression data.

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2006, Genome informatics. International Conference on Genome Informatics.

Genomic Object Net: I. A platform for modelling and simulating biopathways.

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2003, Applied bioinformatics.

Development of a knowledge‐based system for voltage/reactive power operation planning

Atsushi Doi, Yoshiyuki Kono, Yuichi Omichi, 1991 .

Genomic Object Net: II. Modelling biopathways by hybrid functional Petri net with extension.

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2003, Applied bioinformatics.

Development of peak-hour train speed model for dynamic commuter travel forecasting

Atsushi Doi, Seiji Iwakura, Shoichi Watanabe, 2000 .

A versatile petri net based architecture for modeling and simulation of complex biological processes.

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2004, Genome informatics. International Conference on Genome Informatics.

Constructing biological pathway models with hybrid functional Petri net

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2004, Silico Biol..

BPE: Biopathway Executer for Large-Scale Biopathway Modeling and Simulation

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2003 .

Prototype of an Ankle Neurorehabilitation System with Heuristic BCI Using Simplified Fuzzy Reasoning

Atsushi Doi, Norihiko Saga, Suguru N. Kudoh, 2019, Applied Sciences.

Pathway Simulation Software

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2009 .

Computational Genome-Wide Discovery of Aberrant Splice Variations with Exon Expression Profiles

Masao Nagasaki, Atsushi Doi, Satoru Miyano, 2007, 2007 IEEE 7th International Symposium on BioInformatics and BioEngineering.

Distributed Client-Server System Architecture for High Performance Simulations on Genomic Object Net

Tomokazu Kono, Masao Nagasaki, Atsushi Doi, 2003 .

Towards Biopathway Modeling and Simulation

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2003, ICATPN.

Automatic drawing of biological networks using cross cost and subcomponent data.

Masao Nagasaki, Atsushi Doi, Satoru Miyano, 2005, Genome informatics. International Conference on Genome Informatics.

Genomic Object Net: Object Oriented Representation of Biological Systems

Atsushi Doi, Hiroshi Matsuno, Satoru Miyano, 2000 .

Computational Platform for Systems Biology

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2009 .

Integrating Biopathway Databases for Large-scale Modeling and Simulation

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2004, APBC.

Fault Diagnosis Using Qualitative Reasonings about Dynamic Behavior

Atsushi Doi, Toshiaki Sakaguchi, 1987 .

Starting Cell Illustrator

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2009 .

A statistical framework for genome-wide discovery of biomarker splice variations with GeneChip Human Exon 1.0 ST Arrays.

Masao Nagasaki, Atsushi Doi, Satoru Miyano, 2006, Genome informatics. International Conference on Genome Informatics.

Simulation-Based Validation of the p53 Transcriptional Activity with Hybrid Functional Petri Net.

Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, 2011, Studies in health technology and informatics.

Biopathways representation and simulation on hybrid functional petri net.

Atsushi Doi, Hiroshi Matsuno, Satoru Miyano, 2011, Studies in health technology and informatics.

Analysis of PPARα-dependent and PPARα-independent transcript regulation following fenofibrate treatment of human endothelial cells

Masao Nagasaki, Atsushi Doi, Satoru Miyano, 2009, Angiogenesis.