Christian L. Barrett

发表

Iterative Reconstruction of Transcriptional Regulatory Networks: An Algorithmic Approach

Bernhard O. Palsson, Christian L. Barrett, B. Palsson, 2006, PLoS Comput. Biol..

Decomposing complex reaction networks using random sampling, principal component analysis and basis rotation

Bernhard O. Palsson, Markus J. Herrgård, Christian L. Barrett, 2009, BMC Systems Biology.

Transcriptome Sequencing Reveals Potential Mechanism of Cryptic 3’ Splice Site Selection in SF3B1-mutated Cancers

Dennis Carson, Christopher M. DeBoever, Kristen Jepsen, 2015, PLoS Comput. Biol..

Optimal Hidden Markov Models for All Sequences of Known Structure

Cyrus Chothia, Richard Hughey, Kevin Karplus, 2000 .

Network-level analysis of metabolic regulation in the human red blood cell using random sampling and singular value decomposition

Bernhard O. Palsson, Nathan D. Price, Christian L. Barrett, 2006, BMC Bioinformatics.

Genome-scale reconstruction of the Lrp regulatory network in Escherichia coli

Christian L. Barrett, B. Palsson, E. M. Knight, 2008, Proceedings of the National Academy of Sciences.

Whole-genome resequencing of Escherichia coli K-12 MG1655 undergoing short-term laboratory evolution in lactate minimal media reveals flexible selection of adaptive mutations

Tom M. Conrad, Christian L. Barrett, B. Palsson, 2009, Genome Biology.

Transcriptome Sequencing of Tumor Subpopulations Reveals a Spectrum of Therapeutic Options for Squamous Cell Lung Cancer

Christian L. Barrett, K. Frazer, O. Harismendy, 2013, PloS one.

Systems biology as a foundation for genome-scale synthetic biology.

Christian L. Barrett, B. Palsson, S. Lee, 2006, Current opinion in biotechnology.

ADAR1 promotes malignant progenitor reprogramming in chronic myeloid leukemia

Jessica M. Rusert, Marco A. Marra, Kelly A. Frazer, 2012, Proceedings of the National Academy of Sciences.

Cumulative Number of Cell Divisions as a Meaningful Timescale for Adaptive Laboratory Evolution of Escherichia coli

Adam M. Feist, Bernhard Ø. Palsson, Dae-Hee Lee, 2011, PloS one.

Systematic transcriptome analysis reveals tumor-specific isoforms for ovarian cancer diagnosis and therapy

Christopher M. DeBoever, Kristen Jepsen, Kelly A. Frazer, 2015, Proceedings of the National Academy of Sciences.

Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts.

Byung-Kwan Cho, Bernhard Ø. Palsson, Christian L. Barrett, 2008, Genome research.

Sensitive and accurate identification of protein–DNA binding events in ChIP-chip assays using higher order derivative analysis

Bernhard O. Palsson, Byung-Kwan Cho, Christian L. Barrett, 2011, Nucleic acids research.

Productionof pilus-like¢laments inGeobacter sulfurreducens in theabsenceofthe type IVpilin proteinPilA

Christian L. Barrett, A. Franks, D. Lovley, 2010 .

Production of pilus-like filaments in Geobacter sulfurreducens in the absence of the type IV pilin protein PilA.

Christian L. Barrett, A. Franks, D. Lovley, 2010, FEMS microbiology letters.

An RNA editing fingerprint of cancer stem cell reprogramming

Christian L. Barrett, K. Frazer, L. Crews, 2015, Journal of Translational Medicine.

De Novo Assembly of the Complete Genome of an Enhanced Electricity-Producing Variant of Geobacter sulfurreducens Using Only Short Reads

Christian L. Barrett, B. Palsson, D. Lovley, 2010, PloS one.

Characterizing the interplay between multiple levels of organization within bacterial sigma factor regulatory networks

Christian L. Barrett, Kelly P. Nevin, B. Palsson, 2013, Nature Communications.

Meta-structure of a Bacterial Genome

Christian L. Barrett, E. M. Knight, Byung-Kwan Cho, 2022 .

ADAR1 Activation Drives Leukemia Stem Cell Self-Renewal by Impairing Let-7 Biogenesis.

Maurizio Pellecchia, Gabriel Pineda, Christian L. Barrett, 2016, Cell stem cell.

A Pan-BCL2 inhibitor renders bone-marrow-resident human leukemia stem cells sensitive to tyrosine kinase inhibition.

Jessica M. Rusert, Christian L. Barrett, T. Hudson, 2013, Cell stem cell.

Reversion to an embryonic alternative splicing program enhances leukemia stem cell self-renewal

Richard A. Moore, Christian L. Barrett, K. Frazer, 2015, Proceedings of the National Academy of Sciences.

A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution.

Christian L. Barrett, Kelly P. Nevin, B. Palsson, 2011, Environmental microbiology.

The global transcriptional regulatory network for metabolism in Escherichia coli exhibits few dominant functional states.

Bernhard O Palsson, Jennifer L Reed, Christian L. Barrett, 2005, Proceedings of the National Academy of Sciences of the United States of America.

The transcription unit architecture of the Escherichia coli genome

Karsten Zengler, Byung-Kwan Cho, Bernhard Ø Palsson, 2009, Nature Biotechnology.

Combination Targeted Therapy to Impair Self-Renewal Capacity of Human Blast Crisis Leukemia Stem Cells

Christian L. Barrett, K. Frazer, M. Marra, 2011 .

An RNA editing fingerprint of cancer stem cell reprogramming

Christian L. Barrett, K. Frazer, L. Crews, 2015, Journal of Translational Medicine.

Genetic and epigenetic profiling of CLL disease progression reveals limited somatic evolution and suggests a relationship to memory-cell development

Christopher M. DeBoever, Christian L. Barrett, Peter J. Shepard, 2015, Blood Cancer Journal.

Cycling Toward Leukemia Stem Cell Elimination Wtih a Selective Sonic Hedgehog Antagonist

Christian L. Barrett, T. Hudson, J. McPherson, 2011 .

A Pan-BCL2 inhibitor renders bone-marrow-resident human leukemia stem cells sensitive to tyrosine kinase inhibition.

Jessica M. Rusert, Christian L. Barrett, T. Hudson, 2013, Cell stem cell.

ADAR1 Activation Drives Leukemia Stem Cell Self-Renewal by Impairing Let-7 Biogenesis.

Christian L. Barrett, K. Frazer, M. Marra, 2016, Cell stem cell.

ADAR1 promotes malignant progenitor reprogramming in chronic myeloid leukemia

Jessica M. Rusert, Christian L. Barrett, K. Frazer, 2012, Proceedings of the National Academy of Sciences.

Decomposing complex reaction networks using random sampling, principal component analysis and basis rotation

Markus J. Herrgård, Christian L. Barrett, B. Palsson, 2009, BMC Systems Biology.

Network-level analysis of metabolic regulation in the human red blood cell using random sampling and singular value decomposition

Christian L. Barrett, B. Palsson, N. Price, 2006, BMC Bioinformatics.