Nevan J. Krogan

发表

Prediction of Functionally Important Phospho-Regulatory Events in Xenopus laevis Oocytes

Pedro Beltrão, Ursula Pieper, Jeffrey R. Johnson, 2015, PLoS Comput. Biol..

Optimal stepwise experimental design for pairwise functional interaction studies

Fergal P. Casey, Nevan J. Krogan, Gerard Cagney, 2008, Bioinform..

Distinct configurations of protein complexes and biochemical pathways revealed by epistatic interaction network motifs

Fergal P. Casey, Nevan J. Krogan, Gerard Cagney, 2011, BMC Systems Biology.

PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs

Albert Chan, Ashkan Golshani, Frank Dehne, 2006, BMC Bioinformatics.

Improved functional overview of protein complexes using inferred epistatic relationships

Derek Greene, Padraig Cunningham, Nevan J. Krogan, 2011, BMC Systems Biology.

Functional Maps of Protein Complexes from Quantitative Genetic Interaction Data

Trey Ideker, Nevan J. Krogan, Sourav Bandyopadhyay, 2008, PLoS Comput. Biol..

Non-degradative Ubiquitination of Protein Kinases

Jeffrey R. Johnson, Nevan J. Krogan, Matthew P. Jacobson, 2016, PLoS Comput. Biol..

Ensemble non-negative matrix factorization methods for clustering protein-protein interactions

Derek Greene, Padraig Cunningham, Nevan J. Krogan, 2008, Bioinform..

Abstract 1317: Multi-scale mapping of the physical and functional architecture of the cancer cell

Trey Ideker, Nevan J. Krogan, Minkyu Kim, 2018 .

Global landscape of HIV–human protein complexes

John H. Morris, Tom Alber, Eyal Akiva, 2011, Nature.

Abstract PHB03: A hierarchical model of DNA repair inferred from omics-scale genetic interaction data reveals the dynamics of DNA damage induction

Trey Ideker, Nevan J. Krogan, Anton Kratz, 2020 .

Erratum: COMPASS: A complex of proteins associated with a trithorax-related SET domain protein (Proceedings of the National Academy of Sciences of the United States of America (November 6, 2001) 98:23 (112902-12907))

Nevan J. Krogan, Paul Tempst, Jack Greenblatt, 2001 .

GPS-Prot: A web-based visualization platform for integrating host-pathogen interaction data

Nevan J. Krogan, Dhiraj Kumar, Alex Shapiro, 2011, BMC Bioinformatics.

Inhibition of RNA lariat debranching enzyme suppresses TDP-43 toxicity in ALS disease models

Matthew J. Higgins, Nevan J. Krogan, Steven Finkbeiner, 2012, Nature Genetics.

COMPASS: A complex of proteins associated with a trithorax-related SET domain protein

Nevan J. Krogan, Paul Tempst, Trissa Miller, 2001, Proceedings of the National Academy of Sciences of the United States of America.

From systems to structure: bridging networks and mechanism.

Nevan J. Krogan, James S. Fraser, N. Krogan, 2013, Molecular cell.

Genome-Wide Association Data Reveal a Global Map of Genetic Interactions among Protein Complexes

Richard M. Karp, Trey Ideker, Nevan J. Krogan, 2009, PLoS genetics.

Characterization of a Six-Subunit Holo-Elongator Complex Required for the Regulated Expression of a Group of Genes in Saccharomyces cerevisiae

Nevan J. Krogan, N. Krogan, J. Greenblatt, 2001, Molecular and Cellular Biology.

Inhibition of CRISPR-Cas9 with Bacteriophage Proteins

Nevan J. Krogan, Joseph Bondy-Denomy, N. Krogan, 2017, Cell.

Eisosome proteins assemble into a membrane scaffold

Nevan J. Krogan, Scott D. Emr, Juha T. Huiskonen, 2011, The Journal of cell biology.

Vif hijacks CBF-β to degrade APOBEC3G and promote HIV-1 infection

Andrej Sali, Nevan J. Krogan, Peter Cimermancic, 2011, Nature.

An Approach to Spatiotemporally Resolve Protein Interaction Networks in Living Cells

Nevan J. Krogan, Mark von Zastrow, Kenneth B. Miller, 2017, Cell.

Functional genomic screens identify human host factors for SARS-CoV-2 and common cold coronaviruses

Nevan J. Krogan, Jared Carlson-Stevermer, Mehdi Bouhaddou, 2020, bioRxiv.

Cotranscriptional Set2 Methylation of Histone H3 Lysine 36 Recruits a Repressive Rpd3 Complex

Nevan J. Krogan, Brian D. Strahl, Timothy R. Hughes, 2005, Cell.

A Genome-Wide Screen Identifies the Evolutionarily Conserved KEOPS Complex as a Telomere Regulator

David Lydall, Nevan J. Krogan, Andrew Emili, 2006, Cell.

The Psychiatric Cell Map Initiative: A Convergent Systems Biological Approach to Illuminating Key Molecular Pathways in Neuropsychiatric Disorders

Nevan J. Krogan, A. Jeremy Willsey, N. Krogan, 2018, Cell.

COMPASS, a Histone H3 (Lysine 4) Methyltransferase Required for Telomeric Silencing of Gene Expression*

Nevan J. Krogan, Mark Johnston, Jessica Schneider, 2002, The Journal of Biological Chemistry.

The Global Phosphorylation Landscape of SARS-CoV-2 Infection

Andrew R. Leach, Anna Gaulton, Aurelien Dugourd, 2020, Cell.

All or Nothing: Protein Complexes Flip Essentiality between Distantly Related Eukaryotes

Nevan J. Krogan, Pádraig Cunningham, Gerard Cagney, 2013, Genome biology and evolution.

Quantitative Genetic Interactions Reveal Biological Modularity

Nevan J. Krogan, Gerard Cagney, Pedro Beltrao, 2010, Cell.

Cotranscriptional Set 2 Methylation of Histone H 3 Lysine 36 Recruits a Repressive Rpd 3 Complex

Nevan J. Krogan, Brian D. Strahl, Timothy R. Hughes, 2005 .

A Snf 2 Family ATPase Complex Required for Recruitment of the Histone H 2 A Variant Htz

Nevan J. Krogan, Huiming Ding, Timothy R. Hughes, 2003 .

Inhibition of a NEDD8 Cascade Restores Restriction of HIV by APOBEC3G

Nevan J. Krogan, Shigeyuki Yokoyama, Linda Yen, 2012, PLoS pathogens.

A SARS-CoV-2-Human Protein-Protein Interaction Map Reveals Drug Targets and Potential Drug-Repurposing

Trey Ideker, Claudia Hernandez-Armenta, Brian K. Shoichet, 2020, bioRxiv.

A Panoramic View of Yeast Noncoding RNA Processing

Brendan J. Frey, Mark D. Robinson, Nevan J. Krogan, 2003, Cell.

Correction: Evolution of Phosphoregulation: Comparison of Phosphorylation Patterns across Yeast Species

Wendell A. Lim, Nevan J. Krogan, Alma L. Burlingame, 2009, PLoS Biology.

A Complex-based Reconstruction of the Saccharomyces cerevisiae Interactome *S⃞

Daphne Koller, Nevan J. Krogan, Kevan M. Shokat, 2009, Molecular & Cellular Proteomics.

High-resolution network biology: connecting sequence with function

Zachary A. Szpiech, Andrej Sali, Nevan J. Krogan, 2013, Nature Reviews Genetics.

A lipid E-MAP identifies Ubx2 as a critical regulator of lipid saturation and lipid bilayer stress.

Nevan J. Krogan, Hannes Braberg, Christer S. Ejsing, 2013, Molecular cell.