Kenji Yasuoka

Tetsu Narumi, Kenji Yasuoka, Ryuji Sakamaki, 2008, 2008 Ninth International Conference on Parallel and Distributed Computing, Applications and Technologies.

Current performance gains from utilizing the GPU or the ASIC MDGRAPE‐3 within an enhanced Poisson Boltzmann approach

Makoto Taiji, Siegfried Höfinger, Tetsu Narumi, 2009, J. Comput. Chem..

A smooth‐particle mesh Ewald method for DL_POLY molecular dynamics simulation package on the Fujitsu VPP700

Toshikazu Ebisuzaki, Thomas A. Darden, Kenji Yasuoka, 2000 .

Simulations of magnetic materials with MDGRAPE-2

Toshikazu Ebisuzaki, Ryutaro Susukita, Hideaki Furusawa, 2004, IBM J. Res. Dev..

A highly vectorised "link-cell" FORTRAN code for the DL_POLY molecular dynamics simulation package

Toshikazu Ebisuzaki, Kenji Yasuoka, Kholmirzo Kholmurodov, 2000 .

Parallelized Simulation of Molecular Dynamics with a Special-Purpose Computer: MDGRAPE-2

Toshikazu Ebisuzaki, Makoto Taiji, Tetsu Narumi, 2003 .

Accelerating Molecular Dynamics Simulations on PlayStation 3 Platform Using Virtual-GRAPE Programming Model

Makoto Taiji, Tetsu Narumi, Kenji Yasuoka, 2008, SIAM J. Sci. Comput..

Accelerating molecular dynamics simulation using graphics processing unit

Tetsu Narumi, Kenji Yasuoka, Ryuji Sakamaki, 2010 .

Development and Application of FMO Calculation − DPD Simulation Conbination Scheme

Kenji Yasuoka, Yuji Mochizuki, Hideo Doi, 2018 .

Utilizing natural physical reservoir realized on noisy superconducting quantum processors for temporal information processing

Kenji Yasuoka, Naoki Yamamoto, Yudai Suzuki, 2021, The Proceedings of Conference of Kanto Branch.

Deep Learning Model with Invariance and Equivariance of Multiple Particles for Molecular Data Analysis

Kenji Yasuoka, Katsuhiro Endo, Yuto Yamada, 2021, The Proceedings of Conference of Kanto Branch.

Speeding up Monte Carlo molecular simulations using machine learning

Kenji Yasuoka, Katsuhiro Endo, 2021, The Proceedings of Conference of Kanto Branch.

Molecular Dynamics Simulations of Prion Proteins-Effect of Ala117 .RAR.Val mutation-

Toshikazu Ebisuzaki, Ryutaro Susukita, Hideaki Furusawa, 2003 .

Large-scale molecular-dynamics simulation of nanoscale hydrophobic interaction and nanobubble formation.

Toshikazu Ebisuzaki, Kenji Yasuoka, T. Ebisuzaki, 2005, The Journal of chemical physics.

Simulation of transitions between "pasta" phases in dense matter.

Toshikazu Ebisuzaki, Toshiki Maruyama, Kenji Yasuoka, 2005, Physical review letters.

Cutoff radius effect of the isotropic periodic sum method in homogeneous system. II. Water.

Tetsu Narumi, Kenji Yasuoka, Kazuaki Z. Takahashi, 2010, The Journal of chemical physics.

Structure of cold nuclear matter at subnuclear densities by Quantum Molecular Dynamics

Toshikazu Ebisuzaki, Kenji Yasuoka, Katsuhiko Sato, 2003 .

Acceleration of Vortex Method Calculation using MDGRAPE-2: A special purpose computer

Shinnosuke Obi, Kenji Yasuoka, T. K. Sheel, 2005 .

Molecular dynamics of homogeneous nucleation in the vapor phase. I. Lennard-Jones fluid

Kenji Yasuoka, M. Matsumoto, K. Yasuoka, 1998 .

Diffusive nature of xenon anesthetic changes properties of a lipid bilayer: molecular dynamics simulations.

Kenji Yasuoka, Takuma Akimoto, Masato Yasui, 2012, The journal of physical chemistry. B.

Molecular dynamics simulations of valinomycin interactions with potassium and sodium ions in water solvent

Kenji Yasuoka, Kholmirzo Kholmurodov, Maria Abasheva, 2010 .

Cut-off radius effect of the isotropic periodic sum method for polar molecules in a bulk water system

Tetsu Narumi, Kenji Yasuoka, Kazuaki Z. Takahashi, 2012 .

Structural features of aquaporin 4 supporting the formation of arrays and junctions in biomembranes.

Siegfried Höfinger, Tetsu Narumi, Kenji Yasuoka, 2012, Biochimica et biophysica acta.

Extended study of molecular dynamics simulation of homogeneous vapor-liquid nucleation of water.

Toshikazu Ebisuzaki, Kenji Yasuoka, T. Ebisuzaki, 2007, The Journal of chemical physics.

Cutoff radius effect of the isotropic periodic sum and Wolf method in liquid-vapor interfaces of water.

Tetsu Narumi, Kenji Yasuoka, Kazuaki Z. Takahashi, 2011, The Journal of chemical physics.

Cutoff radius effect of isotropic periodic sum method for transport coefficients of Lennard-Jones liquid.

Tetsu Narumi, Kenji Yasuoka, Kazuaki Z. Takahashi, 2007, The Journal of chemical physics.

Coexistence and transition between Cassie and Wenzel state on pillared hydrophobic surface

Toshikazu Ebisuzaki, Kenji Yasuoka, Xiao Cheng Zeng, 2009, Proceedings of the National Academy of Sciences.

Molecular dynamics of homogeneous nucleation in the vapor phase. II. Water

Kenji Yasuoka, M. Matsumoto, K. Yasuoka, 1998 .

Microscopic Study of Slablike and Rodlike Nuclei: Quantum Molecular Dynamics Approach

Toshikazu Ebisuzaki, Kenji Yasuoka, T. Ebisuzaki, 2002 .

Fast vortex method calculation using a special-purpose computer

Shinnosuke Obi, Kenji Yasuoka, T. K. Sheel, 2007 .

The study of colliding vortex rings using a special-purpose computer and FMM ⁄

Shinnosuke Obi, Rio Yokota, Kenji Yasuoka, 2008 .

Molecular dynamics of homogeneous nucleation in the vapor phase of Lennard-Jones. III. Effect of carrier gas pressure.

Kenji Yasuoka, X. Zeng, K. Yasuoka, 2007, The Journal of chemical physics.

Phase diagram of nuclear pasta and its uncertainties in supernova cores

Toshikazu Ebisuzaki, Kenji Yasuoka, Katsuhiko Sato, 2008 .

Molecular dynamics study on class A β-lactamase: Hydrogen bond network among the functional groups of penicillin G and side chains of the conserved residues in the active site

Toshikazu Ebisuzaki, Ryutaro Susukita, Hideaki Furusawa, 2003 .

Formation of nuclear "pasta" in supernovae.

Toshikazu Ebisuzaki, Toshiki Maruyama, Kenji Yasuoka, 2009, Physical review letters.