Daniel Pinkel

发表

Intercellular fluorescence background on microscope slides: some problems and solutions for automatic analysis

Jim Piper, Donald Peters, Damir Sudar, 1994, Electronic Imaging.

Interactive system for registering adjacent tissue sections

Damir Sudar, Carlos Fernandez, Daniel Pinkel, 1998, Photonics West - Biomedical Optics.

Analytical biotechnology: Tools to characterize cells and their contents

Norman J. Dovichi, Daniel Pinkel, D. Pinkel, 2003 .

Technical approaches for efficient high-precision nucleic acid analysis using DNA microarrays

Joe W. Gray, Nils Brown, John Hanson, 2002, SPIE BiOS.

Fluorescent Nucleic Acid Hybridization Methods.

Joe W. Gray, P. N. Dean, Daniel Pinkel, 1989, Photonics West - Lasers and Applications in Science and Engineering.

Abstract 52: QDNAseq: A bioinformatics pipeline for DNA copy number analysis from shallow whole genome sequencing with noise levels near the probabilistic lower limit imposed by read counting

Bauke Ylstra, Mark A. van de Wiel, Martijn Cordes, 2016 .

Academic Editor: Jonathan Rees, University of Edinburgh, United Kingdom

Jane Fridlyand, Daniel Pinkel, Claus Garbe, 2007 .

Large-scale variation among human and great ape genomes determined by array comparative genomic hybridization.

Daniel Pinkel, Richard Segraves, Evan E Eichler, 2003, Genome research.

Genomic microarrays in human genetic disease and cancer.

Daniel Pinkel, D. Pinkel, D. Albertson, 2003, Human molecular genetics.

MALT1 is deregulated by both chromosomal translocation and amplification in B-cell non-Hodgkin lymphoma.

Peter Marynen, Reiner Siebert, Randy D Gascoyne, 2003, Blood.

Discovery of previously unidentified genomic disorders from the duplication architecture of the human genome

Andrew J Sharp, Edward Blair, Stuart Schwartz, 2006, Nature Genetics.

Cancer cells, chemotherapy and gene clusters

Daniel Pinkel, D. Pinkel, 2000, Nature Genetics.

Characterization of 8p21.3 chromosomal deletions in B-cell lymphoma: TRAIL-R1 and TRAIL-R2 as candidate dosage-dependent tumor suppressor genes.

Markus Schilhabel, Reiner Siebert, Daniel Pinkel, 2005, Blood.

Classifying melanocytic tumors based on DNA copy number changes.

Daniel Pinkel, D. Pinkel, A. Olshen, 2003, The American journal of pathology.

Whole genome analysis of genetic alterations in small DNA samples using hyperbranched strand displacement amplification and array-CGH.

Daniel Pinkel, Richard Segraves, J. Leamon, 2003, Genome research.

Fully automatic quantification of microarray image data.

Ajay N. Jain, Ajay N Jain, Daniel Pinkel, 2002, Genome research.

Slit-scan flow cytometry: analysis of Chinese hamster M3-1 chromosomes

Joe W. Gray, Daniel Pinkel, D. Pinkel, 1981 .

Genomic profiling of gastric cancer predicts lymph node status and survival

Ivar Siccama, Daniel Pinkel, Marjan M Weiss, 2003, Oncogene.

Integrated genomic and epigenomic analyses pinpoint biallelic gene inactivation in tumors

Colin C. Collins, Chibo Hong, Joseph F. Costello, 2002, Nature Genetics.

Genome scanning with array CGH delineates regional alterations in mouse islet carcinomas

Joe W. Gray, Graeme Hodgson, Daniel Pinkel, 2001, Nature Genetics.

Cytogenetic analysis using quantitative, high-sensitivity

Joe W. Gray, T. Straume, Daniel Pinkel, 1986 .

A collection of breast cancer cell lines for the study of functionally distinct cancer subtypes.

Wen-Lin Kuo, Jane Fridlyand, Terry Speed, 2006, Cancer cell.

Comparative genomic hybridization to microarrays as a means to study copy number variation in human disease

Daniel Pinkel, Donna G. Albertson, 2002 .

Determination of amplicon boundaries at 20q13.2 in tissue samples of human gastric adenocarcinomas by high‐resolution microarray comparative genomic hybridization

Bauke Ylstra, Daniel Pinkel, Marjan M Weiss, 2003, The Journal of pathology.

Erratum: "Hidden Markov models approach to the analysis of array CGH data" (Journal of Multivariate Analysis (2004) vol. 90 (132-153) 10.1016/j.jmva.2004.02.008)

Jane Fridlyand, Ajay N. Jain, Daniel Pinkel, 2005 .

Array-based comparative genomic hybridization for genome-wide screening of DNA copy number in bladder tumors.

Wen-Lin Kuo, Jane Fridlyand, Ajay N. Jain, 2003, Cancer research.

DNA copy number analysis of fresh and formalin-fixed specimens by shallow whole-genome sequencing with identification and exclusion of problematic regions in the genome assembly

Pieter Wesseling, Mark A van de Wiel, Bauke Ylstra, 2014, Genome research.

Whole genome scanning identifies genotypes associated with recurrence and metastasis in prostate tumors.

Jane Fridlyand, Ajay N. Jain, Ajay N Jain, 2005, Human molecular genetics.

Whole genome scanning identifies genotypes associated with recurrence and metastasis in prostate tumors

Jane Fridlyand, Ajay N. Jain, Mark A. Rubin, 2004 .

PIK3CA is implicated as an oncogene in ovarian cancer

Joe W. Gray, Yiling Lu, Wen-Lin Kuo, 1999, Nature Genetics.

Array Comparative Genomic Hybridization Identifies Genetic Subgroups in Grade 4 Human Astrocytoma

Ivan Smirnov, Daniel Pinkel, D. Pinkel, 2005, Clinical Cancer Research.

Current status and future prospects of array-based comparative genomic hybridisation.

Daniel Pinkel, D. Pinkel, D. Albertson, 2003, Briefings in functional genomics & proteomics.

Introduction to fluorescence microscopy, by J. S. Ploem and H. J. Tanke. Oxford University Press, New York, 1987, 56 pages, $10.95

Daniel Pinkel, 1988 .

Transformation of follicular lymphoma to diffuse large cell lymphoma is associated with a heterogeneous set of DNA copy number and gene expression alterations.

Ash A. Alizadeh, Ash A Alizadeh, Daniel Pinkel, 2003, Blood.

Shaping of tumor and drug-resistant genomes by instability and selection

Jane Fridlyand, Ajay N. Jain, Ajay N Jain, 2003, Oncogene.