Alex Greenfield

SCORCh.R: Clustering and visualization of sequencing derived multiple transcription factor loci

Richard Bonneau, Dan R. Littman, Kieran Mace, 2005 .

Robust data-driven incorporation of prior knowledge into the inference of dynamic regulatory networks

Richard Bonneau, Christoph Hafemeister, Alex Greenfield, 2013, Bioinform..

Androgen receptor antagonism by divalent ethisterone conjugates in castrate-resistant prostate cancer cells.

Richard Bonneau, Paul M. Levine, Kent Kirshenbaum, 2012, ACS chemical biology.

Integrated inference and analysis of regulatory networks from multi-level measurements.

Richard Bonneau, Christopher S. Poultney, Alex Greenfield, 2012, Methods in cell biology.

The inferelator 2.0: A scalable framework for reconstruction of dynamic regulatory network models

Richard Bonneau, Eric Vanden-Eijnden, Aviv Madar, 2009, 2009 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

DREAM3: Network Inference Using Dynamic Context Likelihood of Relatedness and the Inferelator

Richard Bonneau, Eric Vanden-Eijnden, Aviv Madar, 2010, PloS one.