Ian C. McDowell

发表

Context Specific and Differential Gene Co-expression Networks via Bayesian Biclustering

Chuan Gao, Ian C. McDowell, Shiwen Zhao, 2016, PLoS Comput. Biol..

Clustering gene expression time series data using an infinite Gaussian process mixture model

Amy K. Schmid, Ian C. McDowell, Barbara E. Engelhardt, 2017 .

Clustering gene expression time series data using an infinite Gaussian process mixture model

Amy K. Schmid, Dinesh Manandhar, Ian C. McDowell, 2017, bioRxiv.

Causal network inference from gene transcriptional time-series response to glucocorticoids

Jonathan Lu, Ian C. McDowell, Barbara E. Engelhardt, 2019, bioRxiv.

Causal network inference from gene transcriptional time-series response to glucocorticoids

Ian C. McDowell, Barbara E. Engelhardt, Brian Jo, 2021, PLoS Comput. Biol..

Differential gene co-expression networks via Bayesian biclustering models

Ian C. McDowell, Christopher D. Brown, B. Engelhardt, 2014, 1411.1997.

Transcriptome of American Oysters, Crassostrea virginica, in Response to Bacterial Challenge: Insights into Potential Mechanisms of Disease Resistance

Ian C. McDowell, S. Istrail, C. Lane, 2014, PloS one.

Pre-established Chromatin Interactions Mediate the Genomic Response to Glucocorticoids.

Ian C. McDowell, William H. Majoros, Charles A. Gersbach, 2018, Cell systems.

Distant regulatory effects of genetic variation in multiple human tissues

Eleazar Eskin, Manolis Kellis, Buhm Han, 2016, bioRxiv.

Exploring the phenotypic consequences of tissue specific gene expression variation inferred from GWAS summary statistics

Mary Goldman, Brian Craft, Jingchun Zhu, 2016, Nature Communications.

A long-range flexible billboard model of gene activation

Ian C. McDowell, Christopher M. Vockley, Timothy E. Reddy, 2017, Transcription.

Co-expression networks reveal the tissue-specific regulation of transcription and splicing

Ian C. McDowell, Ariel D. H. Gewirtz, A. Battle, 2016, bioRxiv.

Many long intergenic non-coding RNAs distally regulate mRNA gene expression levels

Ian C. McDowell, Christopher D. Brown, Christopher M. Vockley, 2016, bioRxiv.

Transversions have larger regulatory effects than transitions

Ian C. McDowell, Timothy E. Reddy, A. Allen, 2017, BMC Genomics.

Identification of potential general markers of disease resistance in American oysters, Crassostrea virginica through gene expression studies.

Ian C. McDowell, M. Gómez-Chiarri, L. Villamil, 2014, Fish & shellfish immunology.

Cooperative regulation of coupled oncoprotein translation and stability in triple-negative breast cancer by EGFR and CDK12

Ian C. McDowell, Timothy E. Reddy, C. Nicchitta, 2021, bioRxiv.

Co-expression networks reveal the tissue-specific regulation of transcription and splicing

Alexis Battle, Ian C. McDowell, Emily K. Tsang, 2019 .

Transcriptome of the eastern oyster Crassostrea virginica in response to bacterial challenge

Ian C. McDowell, 2012 .

Genetic effects on gene expression across human tissues

Nicola J. Rinaldi, Ian C. McDowell, Christopher D. Brown, 2017, Nature.

The impact of rare variation on gene expression across tissues

Gao Wang, Mary Goldman, Brian Craft, 2016, Nature.

Direct GR Binding Sites Potentiate Clusters of TF Binding across the Human Genome

Ian C. McDowell, William H. Majoros, Christopher M. Vockley, 2016, Cell.

Epigenome editing of the CFTR-locus for treatment of cystic fibrosis.

Ian C. McDowell, Timothy E. Reddy, S. Randell, 2021, Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society.

Multi-species protein similarity clustering reveals novel expanded immune gene families in the eastern oyster Crassostrea virginica.

Ian C. McDowell, C. Lane, M. Gómez-Chiarri, 2016, Fish & shellfish immunology.

Glucocorticoid receptor recruits to enhancers and drives activation by motif-directed binding

Ian C. McDowell, William H. Majoros, Christopher M. Vockley, 2018, Genome research.

Human genome-wide measurement of drug-responsive regulatory activity

Ian C. McDowell, Christopher M. Vockley, Timothy E. Reddy, 2018, Nature Communications.

Human genome-wide measurement of drug-responsive regulatory activity

Ian C. McDowell, William H. Majoros, Christopher M. Vockley, 2018, Nature Communications.

Exploring the phenotypic consequences of tissue specific gene expression variation inferred from GWAS summary statistics

Nicola J. Rinaldi, Ian C. McDowell, Christopher D. Brown, 2018, Nature Communications.

Genetic Determinants of Adiponectin Regulation Revealed by Pregnancy

Ian C. McDowell, D. Scholtens, J. Richards, 2017, Obesity.

Transversions have larger regulatory effects than transitions

Ian C. McDowell, Timothy E. Reddy, A. Allen, 2017, BMC Genomics.

Genetic effects on gene expression across human tissues

Ian C. McDowell, Christopher D. Brown, Eun Yong Kang, 2018 .

Exploring the Phenotypic Consequences of Tissue Specific Gene Exploring the Phenotypic Consequences of Tissue Specific Gene Expression Variation Inferred from GWAS Summary Statistics Expression Variation Inferred from GWAS Summary Statistics

Ian C. McDowell, Christopher D. Brown, Eun Yong Kang, 2021 .

Transcriptome of American Oysters, Transcriptome of American Oysters, Crassostrea virginica, in , in Response to Bacterial Challenge: Insights into Potential Response to Bacterial Challenge: Insights into Potential Mechanisms of Disease Resistance Mechanisms of Disease Resistance

Ian C. McDowell, S. Istrail, M. Gómez-Chiarri, 2022 .

Cooperative regulation of coupled oncoprotein synthesis and stability in triple-negative breast cancer by EGFR and CDK12/13

Ian C. McDowell, C. Nicchitta, K. Wood, 2023, Proceedings of the National Academy of Sciences of the United States of America.

Co-expression networks reveal the tissue-specific regulation of transcription and splicing

Ian C. McDowell, Ariel D. H. Gewirtz, Yungil Kim, 2016, bioRxiv.