Daniel E. Almonacid

MACiE: exploring the diversity of biochemical reactions

Gemma L. Holliday, William R. Pearson, Syed Asad Rahman, 2011, Nucleic Acids Res..

MACiE: a database of enzyme reaction mechanisms

Peter Murray-Rust, Janet M. Thornton, Gemma L. Holliday, 2005, Bioinform..

The Structure–Function Linkage Database

Michael A. Hicks, John H. Morris, Conrad C. Huang, 2013, Nucleic Acids Res..

A semiempirical approach to the intra‐phycocyanin and inter‐phycocyanin fluorescence resonance energy‐transfer pathways in phycobilisomes

Daniel E. Almonacid, Adelio R. Matamala, Maximiliano F. Figueroa, 2007, J. Comput. Chem..

MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms

Peter Murray-Rust, Janet M. Thornton, Gemma L. Holliday, 2006, Nucleic Acids Res..

Quantitative Comparison of Catalytic Mechanisms and Overall Reactions in Convergently Evolved Enzymes: Implications for Classification of Enzyme Function

Patricia C. Babbitt, John B. O. Mitchell, Emmanuel R. Yera, 2010, PLoS Comput. Biol..

Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily

Patricia C. Babbitt, Steven C. Almo, Matthew P. Jacobson, 2013, Proceedings of the National Academy of Sciences.