Bonnie L. Hurwitz

The Promises and Pitfalls of Machine Learning for Detecting Viruses in Aquatic Metagenomes

Alise J. Ponsero, Bonnie L. Hurwitz, B. Hurwitz, 2019, Front. Microbiol..

Planet Microbe: An Ontology-Enriched Cyberinfrastructure System for FAIR Marine ‘Omics Data

Pier Luigi Buttigieg, Matthew Bomhoff, Alise J. Ponsero, 2020 .

COVID-19 pandemic reveals the peril of ignoring metadata standards

Robert D. Finn, Ilene Karsch Mizrachi, Susanna-Assunta Sansone, 2020, Scientific Data.

Libra: Improved Partitioning Strategies for Massive Comparative Metagenomics Analysis

John H. Hartman, Ken Youens-Clark, Illyoung Choi, 2018, ScienceCloud@HPDC.

Gramene: a growing plant comparative genomics resource

Lincoln Stein, Edward S. Buckler, Dean Ravenscroft, 2007, Nucleic Acids Res..

VirSorter: mining viral signal from microbial genomic data

Matthew B. Sullivan, Simon Roux, Bonnie L. Hurwitz, 2015, PeerJ.

The Pacific Ocean Virome (POV): A Marine Viral Metagenomic Dataset and Associated Protein Clusters for Quantitative Viral Ecology

Matthew B. Sullivan, Bonnie L. Hurwitz, B. Hurwitz, 2013, PloS one.