Alexis Criscuolo

发表

A fast alignment-free bioinformatics procedure to infer accurate distance-based phylogenetic trees from genome assemblies

Alexis Criscuolo, A. Criscuolo, 2019, Research Ideas and Outcomes.

AlienTrimmer removes adapter oligonucleotides with high sensitivity in short-insert paired-end reads. Commentary on Turner (2014) Assessment of insert sizes and adapter content in FASTQ data from NexteraXT libraries

Alexis Criscuolo, Sylvain Brisse, S. Brisse, 2014, Front. Genet..

BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments

Alexis Criscuolo, Simonetta Gribaldo, S. Gribaldo, 2010, BMC Evolutionary Biology.

SDM: a fast distance-based approach for (super) tree building in phylogenomics.

Olivier Gascuel, Vincent Berry, Alexis Criscuolo, 2006, Systematic biology.

PhySIC: a veto supertree method with desirable properties.

Sylvain Guillemot, Vincent Berry, Vincent Ranwez, 2007, Systematic biology.

Whole genome-based population biology and epidemiological surveillance of Listeria monocytogenes

Eduardo P C Rocha, Matthew Walker, Alexandre Leclercq, 2016, Nature Microbiology.

Uncovering Listeria monocytogenes hypervirulence by harnessing its biodiversity

Eduardo P C Rocha, Alexandre Leclercq, Marie Touchon, 2016, Nature Genetics.

Large-scale phylogenomic analyses indicate a deep origin of primary plastids within cyanobacteria.

Alexis Criscuolo, Simonetta Gribaldo, S. Gribaldo, 2011, Molecular biology and evolution.

Bacteriophages can treat and prevent Pseudomonas aeruginosa lung infections.

Alexis Criscuolo, D. Leduc, L. Touqui, 2010, The Journal of infectious diseases.