The P1/P2 proteins of the human ribosomal stalk are required for ribosome binding and depurination by ricin in human cells

Ricin A‐chain (RTA) depurinates the sarcin–ricin loop of 28S ribosomal RNA and inhibits protein synthesis in mammalian cells. In yeast, the ribosomal stalk facilitates the interaction of RTA with the ribosome and subsequent depurination. Despite homology between the stalk structures from yeast and humans, there are notable differences. The human ribosomal stalk contains two identical heterodimers of P1 and P2 bound to P0, whereas the yeast stalk consists of two different heterodimers, P1α–P2β and P2α–P1β, bound to P0. RTA exhibits higher activity towards mammalian ribosomes than towards ribosomes from other organisms, suggesting that the mode of interaction with ribosomes may vary. Here, we examined whether the human ribosomal stalk proteins facilitate the interaction of RTA with human ribosomes and subsequent depurination of the sarcin–ricin loop. Using small interfering RNA‐mediated knockdown of P1/P2 expression in human cells, we demonstrated that the depurination activity of RTA is lower when P1 and P2 levels are reduced. Biacore analysis showed that ribosomes from P1/P2‐depleted cells have a reduced ability to bind RTA, which correlates with reduced depurination activity both in vitro and inside cells. RTA interacts directly with recombinant human P1–P2 dimer, further demonstrating the importance of human P1 and P2 in enabling RTA to bind and depurinate human ribosomes.

[1]  I. Tanaka,et al.  Archaeal ribosomal stalk protein interacts with translation factors in a nucleotide-independent manner via its conserved C terminus , 2012, Proceedings of the National Academy of Sciences.

[2]  J. Gariépy,et al.  Charged and Hydrophobic Surfaces on the A Chain of Shiga-Like Toxin 1 Recognize the C-Terminal Domain of Ribosomal Stalk Proteins , 2012, PloS one.

[3]  J. Ballesta,et al.  P1 and P2 protein heterodimer binding to the P0 protein of Saccharomyces cerevisiae is relatively non-specific and a source of ribosomal heterogeneity , 2012, Nucleic acids research.

[4]  N. Tumer,et al.  Interaction of ricin and Shiga toxins with ribosomes. , 2012, Current topics in microbiology and immunology.

[5]  R. Spooner,et al.  How ricin and Shiga toxin reach the cytosol of target cells: retrotranslocation from the endoplasmic reticulum. , 2012, Current topics in microbiology and immunology.

[6]  M. Pierce,et al.  Development of a quantitative RT-PCR assay to examine the kinetics of ribosome depurination by ribosome inactivating proteins using Saccharomyces cerevisiae as a model. , 2011, RNA.

[7]  A. Kelley,et al.  The Mechanism for Activation of GTP Hydrolysis on the Ribosome , 2010, Science.

[8]  D. Krokowski,et al.  Pentameric Organization of the Ribosomal Stalk Accelerates Recruitment of Ricin A Chain to the Ribosome for Depurination* , 2010, The Journal of Biological Chemistry.

[9]  W. Tolleson,et al.  A functional quantitative polymerase chain reaction assay for ricin, Shiga toxin, and related ribosome-inactivating proteins. , 2010, Analytical biochemistry.

[10]  J. Ballesta,et al.  A two-step binding model proposed for the electrostatic interactions of ricin a chain with ribosomes. , 2009, Biochemistry.

[11]  V. Schramm,et al.  Detecting ricin: sensitive luminescent assay for ricin A-chain ribosome depurination kinetics. , 2009, Analytical chemistry.

[12]  G. Zhu,et al.  The C-terminal fragment of the ribosomal P protein complexed to trichosanthin reveals the interaction between the ribosome-inactivating protein and the ribosome , 2008, Nucleic acids research.

[13]  J. Ballesta,et al.  The ribosomal stalk is required for ribosome binding, depurination of the rRNA and cytotoxicity of ricin A chain in Saccharomyces cerevisiae , 2008, Molecular microbiology.

[14]  J. Ballesta,et al.  Functional characterization of ribosomal P1/P2 proteins in human cells. , 2008, The Biochemical journal.

[15]  D. Svergun,et al.  Structural Relationships Among the Ribosomal Stalk Proteins from the Three Domains of Life , 2008, Journal of Molecular Evolution.

[16]  P. Shaw,et al.  The C-terminal end of P proteins mediates ribosome inactivation by trichosanthin but does not affect the pokeweed antiviral protein activity. , 2008, Biochemical and biophysical research communications.

[17]  J. Gariépy,et al.  The catalytic subunit of shiga-like toxin 1 interacts with ribosomal stalk proteins and is inhibited by their conserved C-terminal domain. , 2008, Journal of molecular biology.

[18]  C. Robinson,et al.  Structural properties of the human acidic ribosomal P proteins forming the P1-P2 heterocomplex. , 2008, Journal of biochemistry.

[19]  C. Robinson,et al.  Elevated copy number of L-A virus in yeast mutant strains defective in ribosomal stalk. , 2007, Biochemical and biophysical research communications.

[20]  G. Zhu,et al.  Interaction between trichosanthin, a ribosome-inactivating protein, and the ribosomal stalk protein P2 by chemical shift perturbation and mutagenesis analyses , 2007, Nucleic acids research.

[21]  D. Svergun,et al.  Structural characterization of the ribosomal P1A-P2B protein dimer by small-angle X-ray scattering and NMR spectroscopy. , 2007, Biochemistry.

[22]  A. Liljas,et al.  Yeast ribosomal P0 protein has two separate binding sites for P1/P2 proteins , 2006, Molecular microbiology.

[23]  N. Tumer,et al.  Expression of a truncated form of ribosomal protein L3 confers resistance to pokeweed antiviral protein and the Fusarium mycotoxin deoxynivalenol. , 2005, Molecular plant-microbe interactions : MPMI.

[24]  Marina V. Rodnina,et al.  Structural Basis for the Function of the Ribosomal L7/12 Stalk in Factor Binding and GTPase Activation , 2005, Cell.

[25]  D. Krokowski,et al.  Acquisition of a stable structure by yeast ribosomal P0 protein requires binding of P1A-P2B complex: in vitro formation of the stalk structure. , 2005, Biochimica et biophysica acta.

[26]  P. Watson,et al.  Protein disulphide-isomerase reduces ricin to its A and B chains in the endoplasmic reticulum. , 2004, The Biochemical journal.

[27]  S. Olsnes The history of ricin, abrin and related toxins. , 2004, Toxicon : official journal of the International Society on Toxinology.

[28]  A. Liljas,et al.  Structural characterization of yeast acidic ribosomal P proteins forming the P1A-P2B heterocomplex. , 2003, Biochemistry.

[29]  M. Tchórzewski The acidic ribosomal P proteins. , 2002, The international journal of biochemistry & cell biology.

[30]  M. Tchórzewski,et al.  Subcellular distribution of the acidic ribosomal P‐proteins from Saccharomyces cerevisiae in various environmental conditions , 2002, Biology of the cell.

[31]  E. Honjo,et al.  Real-time kinetic analyses of the interaction of ricin toxin A-chain with ribosomes prove a conformational change involved in complex formation. , 2002, Journal of biochemistry.

[32]  M. Wahl,et al.  Structure and function of the acidic ribosomal stalk proteins. , 2002, Current protein & peptide science.

[33]  M. Tchórzewski,et al.  Oligomerization properties of the acidic ribosomal P-proteins from Saccharomyces cerevisiae: effect of P1A protein phosphorylation on the formation of the P1A-P2B hetero-complex. , 2000, Biochimica et biophysica acta.

[34]  J. Wesche,et al.  Dependence of Ricin Toxicity on Translocation of the Toxin A-chain from the Endoplasmic Reticulum to the Cytosol* , 1999, The Journal of Biological Chemistry.

[35]  P. Gonzalo,et al.  Interaction of elongation factor eEF-2 with ribosomal P proteins. , 1999, European journal of biochemistry.

[36]  J. Dinman,et al.  Pokeweed Antiviral Protein Accesses Ribosomes by Binding to L3* , 1999, The Journal of Biological Chemistry.

[37]  M. Tchórzewski,et al.  Overexpression in Escherichia coli, purification, and characterization of recombinant 60S ribosomal acidic proteins from Saccharomyces cerevisiae. , 1999, Protein expression and purification.

[38]  J. Bailey-Serres,et al.  Evolutionary analyses of the 12-kDa acidic ribosomal P-proteins reveal a distinct protein of higher plant ribosomes. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[39]  U. Bommer Ribosomes and polysomes , 1997 .

[40]  J. Ballesta,et al.  The large ribosomal subunit stalk as a regulatory element of the eukaryotic translational machinery. , 1996, Progress in nucleic acid research and molecular biology.

[41]  J. Ballesta,et al.  The Highly Conserved Protein P0 Carboxyl End Is Essential for Ribosome Activity Only in the Absence of Proteins P1 and P2 (*) , 1995, The Journal of Biological Chemistry.

[42]  J. Ballesta,et al.  Eukaryotic acidic phosphoproteins interact with the ribosome through their amino-terminal domain. , 1995, Biochemistry.

[43]  C. Vater,et al.  Ricin A Chain Can Be Chemically Cross-linked to the Mammalian Ribosomal Proteins L9 and L10e (*) , 1995, The Journal of Biological Chemistry.

[44]  G. Lomonossoff,et al.  Correlation between the activities of five ribosome-inactivating proteins in depurination of tobacco ribosomes and inhibition of tobacco mosaic virus infection. , 1994, The Plant journal : for cell and molecular biology.

[45]  L. Roberts,et al.  Ricin: structure, mode of action, and some current applications , 1994, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[46]  A. Monzingo,et al.  The 2.5 A structure of pokeweed antiviral protein. , 1993, Journal of molecular biology.

[47]  G. Legname,et al.  Single‐chain ribosome inactivating proteins from plants depurinate Escherichia coli 23S ribosomal RNA , 1991, FEBS letters.

[48]  J. Ballesta,et al.  Characterization of the yeast acidic ribosomal phosphoproteins using monoclonal antibodies. Proteins L44/L45 and L44' have different functional roles. , 1991, European journal of biochemistry.

[49]  K. Tsurugi,et al.  The site of action of six different ribosome-inactivating proteins from plants on eukaryotic ribosomes: the RNA N-glycosidase activity of the proteins. , 1988, Biochemical and biophysical research communications.

[50]  K. Tsurugi,et al.  The RNA N-glycosidase activity of ricin A-chain. , 1988, Nucleic acids symposium series.

[51]  K. Tsurugi,et al.  RNA N-glycosidase activity of ricin A-chain. Mechanism of action of the toxic lectin ricin on eukaryotic ribosomes. , 1987, The Journal of biological chemistry.

[52]  J. Irvin Pokeweed antiviral protein. , 1983, Pharmacology & therapeutics.

[53]  H. Beevers,et al.  Ricin inhibition of in vitro protein synthesis by plant ribosomes. , 1982, Proceedings of the National Academy of Sciences of the United States of America.

[54]  J. Ballesta,et al.  Acidic ribosomal proteins from eukaryotic cells. Effect on ribosomal functions. , 1979, European journal of biochemistry.

[55]  J. Ballesta,et al.  Acidic ribosomal proteins from eukaryotic cells. Effect on ribosomal functions. , 1979, European journal of biochemistry.