Imaging of Proteins in Tissue Samples Using Nanospray Desorption Electrospray Ionization Mass Spectrometry.

Chemical maps of tissue samples provide important information on biological processes therein. Recently, advances in tissue imaging have been achieved using ambient ionization techniques, such as desorption electrospray ionization mass spectrometry (DESI-MS), but such techniques have been almost exclusively confined to the mapping of lipids and metabolites. We report here the use of nanospray desorption electrospray ionization (nanoDESI) that allows us to image proteins in tissue samples in a label-free manner at atmospheric pressure with only minimum sample preparation. Multiply charged proteins with masses up to 15 kDa were successfully detected by nanoDESI using an LTQ Orbitrap mass spectrometer. In an adult mice brain section, expression of proteins including ubiquitin, β-thymosin, myelin basic protein, and hemoglobin were spatially mapped and characterized. We also determined the location of methylation on myelin basic protein. This imaging modality was further implemented to MYC-induced lymphomas. We observed an array of truncated proteins in the region where normal thymus cells were infiltrated by tumor cells, in contrast to healthy tissue.

[1]  Richard M Caprioli,et al.  Protein signatures for survival and recurrence in metastatic melanoma. , 2011, Journal of proteomics.

[2]  I. Lim,et al.  Biological methylation of myelin basic protein: enzymology and biological significance. , 1997, The international journal of biochemistry & cell biology.

[3]  R. Cooks,et al.  Chemical aspects of the extractive methods of ambient ionization mass spectrometry. , 2013, Annual review of physical chemistry.

[4]  Prabha Dwivedi,et al.  Mass spectrometry: recent advances in direct open air surface sampling/ionization. , 2013, Chemical reviews.

[5]  P. Dorrestein,et al.  Microscopy ambient ionization top-down mass spectrometry reveals developmental patterning , 2013, Proceedings of the National Academy of Sciences.

[6]  Richard M. Caprioli,et al.  Fusion of mass spectrometry and microscopy: a multi-modality paradigm for molecular tissue mapping , 2015, Nature Methods.

[7]  Elizabeth C. Randall,et al.  Direct analysis of intact proteins from Escherichia coli colonies by liquid extraction surface analysis mass spectrometry. , 2014, Analytical chemistry.

[8]  Bernhard Spengler,et al.  Mass spectrometry imaging of biomolecular information. , 2015, Analytical chemistry.

[9]  Yong-Bin Kim,et al.  ProSight PTM: an integrated environment for protein identification and characterization by top-down mass spectrometry , 2004, Nucleic Acids Res..

[10]  Mathew Thomas,et al.  Automated platform for high-resolution tissue imaging using nanospray desorption electrospray ionization mass spectrometry. , 2012, Analytical chemistry.

[11]  B. Spengler,et al.  Metabolite localization by atmospheric pressure high-resolution scanning microprobe matrix-assisted laser desorption/ionization mass spectrometry imaging in whole-body sections and individual organs of the rove beetle Paederus riparius , 2014, Analytical and Bioanalytical Chemistry.

[12]  A. Kiss,et al.  Top‐down mass spectrometry imaging of intact proteins by laser ablation ESI FT‐ICR MS , 2014, Proteomics.

[13]  Richard M Caprioli,et al.  Mass spectrometric profiling of intact biological tissue by using desorption electrospray ionization. , 2005, Angewandte Chemie.

[14]  R. Anadón,et al.  Expression of thymosin β4 messenger RNA in normal and kainate-treated rat forebrain , 1999, Neuroscience.

[15]  H. Cooper,et al.  Top-Down and Bottom-Up Identification of Proteins by Liquid Extraction Surface Analysis Mass Spectrometry of Healthy and Diseased Human Liver Tissue , 2014, Journal of The American Society for Mass Spectrometry.

[16]  R. Zare,et al.  Characterization of MYC-induced tumorigenesis by in situ lipid profiling. , 2013, Analytical chemistry.

[17]  R. Caprioli Deciphering protein molecular signatures in cancer tissues to aid in diagnosis, prognosis, and therapy. , 2005, Cancer research.

[18]  Liang Cheng,et al.  Nondestructive, Histologically Compatible Tissue Imaging by Desorption Electrospray Ionization Mass Spectrometry , 2011, Chembiochem : a European journal of chemical biology.

[19]  R. Caprioli,et al.  Molecular imaging of biological samples: localization of peptides and proteins using MALDI-TOF MS. , 1997, Analytical chemistry.

[20]  R. Tibshirani,et al.  Alteration of the lipid profile in lymphomas induced by MYC overexpression , 2014, Proceedings of the National Academy of Sciences.

[21]  Thomas E Yankeelov,et al.  Co-registration of multi-modality imaging allows for comprehensive analysis of tumor-induced bone disease. , 2014, Bone.

[22]  R. Tibshirani,et al.  Molecular assessment of surgical-resection margins of gastric cancer by mass-spectrometric imaging , 2014, Proceedings of the National Academy of Sciences.

[23]  Richard M Caprioli,et al.  New developments in profiling and imaging of proteins from tissue sections by MALDI mass spectrometry. , 2006, Journal of proteome research.

[24]  Brandi S. Heath,et al.  Tissue imaging using nanospray desorption electrospray ionization mass spectrometry. , 2012, Analytical chemistry.

[25]  G. Hanna,et al.  Discrimination of lymph node metastases using desorption electrospray ionisation-mass spectrometry imaging. , 2014, Chemical communications.

[26]  P. Dorrestein,et al.  Visualizing life with ambient mass spectrometry. , 2015, Current opinion in biotechnology.

[27]  Richard M Caprioli,et al.  Molecular imaging of proteins in tissues by mass spectrometry , 2008, Proceedings of the National Academy of Sciences.