Epigenetic regulation of adaptive responses of forest tree species to the environment
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M. Fraga | K. Vining | S. Strauss | A. Rohde | S. Maury | M. Campbell | M. Guevara | M. Cervera | M. Mirouze | Clément Lafon-Placette | K. Bräutigam | Carl Gunnar Fossdal | José Angel Gutiérrez Marcos | S. Fluch | D. Abarca | Ø. Johnsen | C. Díaz-Sala | Clément Lafon‐Placette | José Gutiérrez Marcos | Marie Mirouze | Katharina Bräutigam
[1] S. Maury,et al. Methylome of DNase I sensitive chromatin in Populus trichocarpa shoot apical meristematic cells: a simplified approach revealing characteristics of gene-body DNA methylation in open chromatin state. , 2013, The New phytologist.
[2] Sibum Sung,et al. Environmentally coordinated epigenetic silencing of FLC by protein and long noncoding RNA components. , 2012, Current opinion in plant biology.
[3] A. Franke,et al. DNA methylome analysis using short bisulfite sequencing data , 2012, Nature Methods.
[4] M. Fraga,et al. Epigenetics and the environment: emerging patterns and implications , 2012, Nature Reviews Genetics.
[5] O. Bossdorf,et al. Evolutionary significance of epigenetic variation , 2012 .
[6] O. Bossdorf,et al. Evolutionary Significance of Epigenetic Variation 16 , 2012 .
[7] S. Strauss,et al. Global regulatory burden for field testing of genetically modified trees , 2012, Tree Genetics & Genomes.
[8] Henry D. Priest,et al. Dynamic DNA cytosine methylation in the Populus trichocarpa genome: tissue-level variation and relationship to gene expression , 2012, BMC Genomics.
[9] G. King,et al. Epigenetic QTL Mapping in Brassica napus , 2011, Genetics.
[10] C. Ku,et al. Studying the epigenome using next generation sequencing , 2011, Journal of Medical Genetics.
[11] C. Helliwell,et al. Epigenetics in plants-vernalisation and hybrid vigour. , 2011, Biochimica et biophysica acta.
[12] W. Aufsatz,et al. Transgenerational epigenetic inheritance in plants. , 2011, Biochimica et biophysica acta.
[13] Erin T. Hamanishi,et al. Clone history shapes Populus drought responses , 2011, Proceedings of the National Academy of Sciences.
[14] Erin T. Hamanishi,et al. Genome-wide responses to drought in forest trees , 2011 .
[15] C. Miguel,et al. An epigenetic view of plant cells cultured in vitro: somaclonal variation and beyond. , 2011, Journal of experimental botany.
[16] M. Mirouze,et al. Epigenetic contribution to stress adaptation in plants. , 2011, Current opinion in plant biology.
[17] B. van Steensel,et al. Chromatin: constructing the big picture , 2011, The EMBO journal.
[18] Stéphane Robin,et al. Integrative epigenomic mapping defines four main chromatin states in Arabidopsis , 2011, The EMBO journal.
[19] E. Bucher,et al. An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress , 2011, Nature.
[20] D. Neale,et al. Forest tree genomics: growing resources and applications , 2011, Nature Reviews Genetics.
[21] W. Peacock,et al. Changes in 24-nt siRNA levels in Arabidopsis hybrids suggest an epigenetic contribution to hybrid vigor , 2011, Proceedings of the National Academy of Sciences.
[22] Sibum Sung,et al. Vernalization-Mediated Epigenetic Silencing by a Long Intronic Noncoding RNA , 2011, Science.
[23] U. Conrath,et al. Chromatin modification acts as a memory for systemic acquired resistance in the plant stress response , 2011, EMBO reports.
[24] M. Van Lijsebettens,et al. Energy efficiency and energy homeostasis as genetic and epigenetic components of plant performance and crop productivity. , 2011, Current opinion in plant biology.
[25] R. Slotkin,et al. Strategies for silencing and escape: the ancient struggle between transposable elements and their hosts. , 2011, International review of cell and molecular biology.
[26] O. Junttila,et al. Differential gene expression related to an epigenetic memory affecting climatic adaptation in Norway spruce. , 2011, Plant science : an international journal of experimental plant biology.
[27] S. Maury,et al. DNA methylation and histone acetylation: genotypic variations in hybrid poplars, impact of water deficit and relationships with productivity , 2011, Annals of Forest Science.
[28] S. Jeandroz,et al. Does maternal environmental condition during reproductive development induce genotypic selection in Picea abies? , 2011, Annals of Forest Science.
[29] E. Finnegan,et al. Plant phenotypic plasticity in a changing climate. , 2010, Trends in plant science.
[30] Danny Reinberg,et al. Molecular Signals of Epigenetic States , 2010, Science.
[31] O. Voinnet,et al. A Small-RNA Perspective on Gametogenesis, Fertilization, and Early Zygotic Development , 2010, Science.
[32] Carl Gunnar Fossdal,et al. MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce. , 2010, The New phytologist.
[33] C. Herrera,et al. Epigenetic differentiation and relationship to adaptive genetic divergence in discrete populations of the violet Viola cazorlensis. , 2010, The New phytologist.
[34] R. Veitia,et al. Heterosis , 2010, Plant Cell.
[35] M. Chase,et al. Stable Epigenetic Effects Impact Adaptation in Allopolyploid Orchids (Dactylorhiza: Orchidaceae) , 2010, Molecular biology and evolution.
[36] A. Wetten,et al. Progressive erosion of genetic and epigenetic variation in callus-derived cocoa (Theobroma cacao) plants. , 2010, The New phytologist.
[37] Tyson A. Clark,et al. Direct detection of DNA methylation during single-molecule, real-time sequencing , 2010, Nature Methods.
[38] C. Parisod,et al. Epigenetic Variation in Mangrove Plants Occurring in Contrasting Natural Environment , 2010, PloS one.
[39] M. Meijón,et al. Variations in DNA methylation, acetylated histone H4, and methylated histone H3 during Pinus radiata needle maturation in relation to the loss of in vitro organogenic capability. , 2010, Journal of plant physiology.
[40] J. J. Jansen,et al. Stress-induced DNA methylation changes and their heritability in asexual dandelions. , 2010, The New phytologist.
[41] Shen Jean Lim,et al. Computational Epigenetics: the new scientific paradigm , 2010, Bioinformation.
[42] P. Wigge,et al. H2A.Z-Containing Nucleosomes Mediate the Thermosensory Response in Arabidopsis , 2010, Cell.
[43] Y. Qi,et al. Global Epigenetic and Transcriptional Trends among Two Rice Subspecies and Their Reciprocal Hybrids[W] , 2010, Plant Cell.
[44] Pao-Yang Chen,et al. BS Seeker: precise mapping for bisulfite sequencing , 2010, BMC Bioinformatics.
[45] S. Doulbeau,et al. DNA Methylation in Acacia mangium In vitro and Ex-vitro Buds, in relation to their Within-shoot Position, Age and Leaf Morphology of the Shoots , 2009 .
[46] Nicholas J Provart,et al. Genotype and time of day shape the Populus drought response. , 2009, The Plant journal : for cell and molecular biology.
[47] Deqiang Zhang,et al. Identification of a Cis-Acting Regulatory Polymorphism in a Eucalypt COBRA-Like Gene Affecting Cellulose Content , 2009, Genetics.
[48] Xiu-Jie Wang,et al. Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids , 2009, Proceedings of the National Academy of Sciences.
[49] T. Kakutani,et al. Bursts of retrotransposition reproduced in Arabidopsis , 2009, Nature.
[50] D. Weigel,et al. Selective epigenetic control of retrotransposition in Arabidopsis , 2009, Nature.
[51] M. Meijón,et al. Acetylated H4 histone and genomic DNA methylation patterns during bud set and bud burst in Castanea sativa. , 2009, Journal of plant physiology.
[52] C. Plomion,et al. Leaf proteome analysis of eight Populus ×euramericana genotypes: Genetic variation in drought response and in water‐use efficiency involves photosynthesis‐related proteins , 2009, Proteomics.
[53] T. Rutten,et al. Aurora1 phosphorylation activity on histone H3 and its cross-talk with other post-translational histone modifications in Arabidopsis. , 2009, The Plant journal : for cell and molecular biology.
[54] S. Otto,et al. Adaptive epigenetic memory of ancestral temperature regime in Arabidopsis thaliana , 2009 .
[55] Frank Johannes,et al. Assessing the Impact of Transgenerational Epigenetic Variation on Complex Traits , 2009, PLoS genetics.
[56] Eva Jablonka,et al. Transgenerational Epigenetic Inheritance: Prevalence, Mechanisms, and Implications for the Study of Heredity and Evolution , 2009, The Quarterly Review of Biology.
[57] G. Theiler,et al. Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes. , 2009, Genes & development.
[58] Dario Grattapaglia,et al. Genomics of growth traits in forest trees. , 2009, Current opinion in plant biology.
[59] Jian-Kang Zhu,et al. Epigenetic regulation of stress responses in plants. , 2009, Current opinion in plant biology.
[60] K. Křížová,et al. Cell Culture-Induced Gradual and Frequent Epigenetic Reprogramming of Invertedly Repeated Tobacco Transgene Epialleles1[W] , 2009, Plant Physiology.
[61] A. Rohde,et al. Bud set - a landmark of the seasonal growth cycle in poplar. , 2009 .
[62] Ø. Johnsen,et al. Rapid change in adaptive performance from one generation to the next in Picea abies—Central European trees in a Nordic environment , 2009, Tree Genetics & Genomes.
[63] R. Masuelli,et al. Phenotypic instability and epigenetic variability in a diploid potato of hybrid origin, Solanum ruiz-lealii , 2009, BMC Plant Biology.
[64] R. Jansen,et al. Epigenome dynamics: a quantitative genetics perspective , 2008, Nature Reviews Genetics.
[65] E. Finnegan,et al. Isolation and expression analysis of genes encoding MET, CMT, and DRM methyltransferases in oil palm (Elaeis guineensis Jacq.) in relation to the 'mantled' somaclonal variation. , 2008, Journal of experimental botany.
[66] S. Nelson,et al. Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning , 2008, Nature.
[67] I. Kovalchuk,et al. Epigenetic control of plant stress response , 2008, Environmental and molecular mutagenesis.
[68] A. Rohde,et al. Remembrances of an embryo: long-term effects on phenology traits in spruce. , 2007, The New phytologist.
[69] M. Pigliucci,et al. Epigenetics for ecologists. , 2007, Ecology letters.
[70] H. Kvaalen,et al. Timing of bud set in Picea abies is regulated by a memory of temperature during zygotic and somatic embryogenesis. , 2007, The New phytologist.
[71] G. Wenzel,et al. Variation in DNA methylation patterns of grapevine somaclones (Vitis vinifera L.) , 2008, BMC Plant Biology.
[72] V. Krauss. Glimpses of evolution: heterochromatic histone H3K9 methyltransferases left its marks behind , 2008, Genetica.
[73] H. Sano,et al. Epigenetic inheritance in rice plants. , 2007, Annals of botany.
[74] Stephane Rombauts,et al. A Molecular Timetable for Apical Bud Formation and Dormancy Induction in Poplar[W] , 2007, The Plant Cell Online.
[75] M. Fraga,et al. Involvement of DNA methylation in tree development and micropropagation , 2007, Plant Cell, Tissue and Organ Culture.
[76] Robert J. Schmitz,et al. Vernalization: a model for investigating epigenetics and eukaryotic gene regulation in plants. , 2007, Biochimica et Biophysica Acta.
[77] Donna M Bond,et al. Passing the message on: inheritance of epigenetic traits. , 2007, Trends in plant science.
[78] Ø. Johnsen,et al. Field performance and early test results of offspring from two Norway spruce seed orchards containing clones transferred to warmer climates , 2007 .
[79] R. Martienssen,et al. Transposable elements and the epigenetic regulation of the genome , 2007, Nature Reviews Genetics.
[80] T. Kouzarides. Chromatin Modifications and Their Function , 2007, Cell.
[81] Estacidn Bioldgica de Doiiana. The adaptedness of the floral phenotype in a relict endemic , hawkmoth-pollinated violet . 2 . Patterns of variation among disjunct populations , 2007 .
[82] Nathan M. Springer,et al. Genomic imprinting, methylation and molecular evolution of maize Enhancer of zeste (Mez) homologs. , 2007, The Plant journal : for cell and molecular biology.
[83] K. Laukens,et al. Gradual Soil Water Depletion Results in Reversible Changes of Gene Expression, Protein Profiles, Ecophysiology, and Growth Performance in Populus euphratica, a Poplar Growing in Arid Regions1[W][OA] , 2006, Plant Physiology.
[84] A. de Daruvar,et al. Mapping the proteome of poplar and application to the discovery of drought‐stress responsive proteins , 2006, Proteomics.
[85] Graham J King,et al. A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening , 2006, Nature Genetics.
[86] P. Perez,et al. Epigenetic asymmetry of imprinted genes in plant gametes , 2006, Nature Genetics.
[87] E. Richards. Inherited epigenetic variation — revisiting soft inheritance , 2006, Nature Reviews Genetics.
[88] F. Berger,et al. Maintenance of DNA Methylation during the Arabidopsis Life Cycle Is Essential for Parental Imprinting[W] , 2006, The Plant Cell Online.
[89] Cathie Martin,et al. The Temperature-Dependent Change in Methylation of the Antirrhinum Transposon Tam3 Is Controlled by the Activity of Its Transposase[W] , 2005, The Plant Cell Online.
[90] P. Ott,et al. Elevated temperature during reproductive development affects cone traits and progeny performance in Picea glauca x engelmannii complex. , 2005, Tree physiology.
[91] W. McCombie,et al. Differential methylation of genes and repeats in land plants. , 2005, Genome research.
[92] Ryan A. Rapp,et al. Epigenetics and plant evolution. , 2005, The New phytologist.
[93] Carl Gunnar Fossdal,et al. Climatic adaptation in Picea abies progenies is affected by the temperature during zygotic embryogenesis and seed maturation , 2005 .
[94] Per Capita,et al. About the authors , 1995, Machine Vision and Applications.
[95] S. Kalisz,et al. Epialleles via DNA methylation: consequences for plant evolution. , 2004, Trends in ecology & evolution.
[96] J. Verdeil,et al. Genomic DNA methylation of juvenile and mature Acacia mangium micropropagated in vitro with reference to leaf morphology as a phase change marker. , 2004, Tree physiology.
[97] R. Martienssen,et al. Vernalization requires epigenetic silencing of FLC by histone methylation , 2004, Nature.
[98] S. Kaeppler,et al. Epigenetic aspects of somaclonal variation in plants , 2000, Plant Molecular Biology.
[99] O. Junttila,et al. Influence of the female flowering environment on autumn frost-hardiness of Picea abies progenies , 1996, Theoretical and Applied Genetics.
[100] T. N. Khoshoo,et al. Genome size in gymnosperms , 2004, Plant Systematics and Evolution.
[101] F. Woodward,et al. Temperature-based population segregation in birch , 2003 .
[102] M. Cervera,et al. Analysis of DNA methylation in Arabidopsis thaliana based on methylation-sensitive AFLP markers , 2002, Molecular Genetics and Genomics.
[103] G. Rehfeldt,et al. Intraspecific responses to climate in Pinus sylvestris , 2002 .
[104] M. Fraga,et al. Genomic DNA methylation-demethylation during aging and reinvigoration of Pinus radiata. , 2002, Tree physiology.
[105] M. Fraga,et al. Phase-change related epigenetic and physiological changes in Pinus radiata D. Don , 2002, Planta.
[106] J. Verdeil,et al. Somaclonal variation in oil palm (Elaeis guineensis Jacq.): the DNA methylation hypothesis , 2000, Plant Cell Reports.
[107] Ø. Johnsen,et al. Patterns of adaptive genetic variation in forest tree species; the reproductive enviroment as an evolutionary force in Picea abies , 2000 .
[108] Pilar Cubas,et al. An epigenetic mutation responsible for natural variation in ̄ oral symmetry , 2022 .
[109] D. Spittlehouse,et al. GENETIC RESPONSES TO CLIMATE IN PINUS CONTORTA: NICHE BREADTH, CLIMATE CHANGE, AND REFORESTATION , 1999 .
[110] W. Binder,et al. Parental environment aftereffects on germination, growth, and adaptive traits in selected white spruce families , 1998 .
[111] M. Greenwood,et al. Genetic aftereffects of increased temperature in Larix , 1996 .
[112] S. Kaeppler,et al. Genetic instability of plant tissue cultures: breakdown of normal controls. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[113] Ø. Johnsen,et al. The timing of bud set in seedlings of Picea abies from seed crops of a cool versus a warm spring and summer , 1994 .
[114] Ø. Johnsen,et al. Effects of the parental environment on full-sib families of Pinussylvestris , 1992 .
[115] S. S. Smith,et al. Maturation in Larch : II. Effects of Age on Photosynthesis and Gene Expression in Developing Foliage. , 1990, Plant physiology.
[116] M. Greenwood,et al. Maturation in larch : I. Effect of age on shoot growth, foliar characteristics, and DNA methylation. , 1989, Plant physiology.
[117] R. B. Hall,et al. DNA REASSOCIATION KINETICS OF FOUR CONIFERS , 1980 .
[118] P. Chouard. Vernalization and its Relations to Dormancy , 1960 .