Lineage-specific expansion of proteins exported to erythrocytes in malaria parasites
暂无分享,去创建一个
Terence P Speed | Elisabet Caler | Matthias Marti | T. Speed | J. Carlton | A. Cowman | T. Sargeant | K. Simpson | E. Caler | Alan F Cowman | M. Marti | Jane M Carlton | Tobias J Sargeant | Ken Simpson
[1] Leann Tilley,et al. Correct Promoter Control Is Needed for Trafficking of the Ring-Infected Erythrocyte Surface Antigen to the Host Cytosol in Transfected Malaria Parasites , 2004, Infection and Immunity.
[2] O. Mercereau‐Puijalon,et al. A new Apicomplexa-specific protein kinase family : multiple members in Plasmodium falciparum, all with an export signature , 2005, BMC Genomics.
[3] D. Lipman,et al. National Center for Biotechnology Information , 2019, Springer Reference Medizin.
[4] Meng-Chang Lee. Top 100 Documents Browse Search Ieee Xplore Guide Support Top 100 Documents Accessed: Nov 2005 a Tutorial on Hidden Markov Models and Selected Applications Inspeech Recognition , 2005 .
[5] Robert C. Edgar,et al. MUSCLE: multiple sequence alignment with high accuracy and high throughput. , 2004, Nucleic acids research.
[6] David L. Tabb,et al. A proteomic view of the Plasmodium falciparum life cycle , 2002, Nature.
[7] D. Kemp,et al. Subtelomeric chromosome deletions in field isolates of Plasmodium falciparum and their relationship to loss of cytoadherence in vitro. , 1989, Proceedings of the National Academy of Sciences of the United States of America.
[8] Y. Benjamini,et al. Controlling the false discovery rate in behavior genetics research , 2001, Behavioural Brain Research.
[9] Christopher J. Tonkin,et al. Dissecting Apicoplast Targeting in the Malaria Parasite Plasmodium falciparum , 2003, Science.
[10] J. Derisi,et al. The Transcriptome of the Intraerythrocytic Developmental Cycle of Plasmodium falciparum , 2003, PLoS biology.
[11] Lawrence R. Rabiner,et al. A tutorial on hidden Markov models and selected applications in speech recognition , 1989, Proc. IEEE.
[12] Melanie Rug,et al. Targeting Malaria Virulence and Remodeling Proteins to the Host Erythrocyte , 2004, Science.
[13] F J Ayala,et al. Evolutionary origin of human and primate malarias: evidence from the circumsporozoite protein gene. , 1995, Molecular biology and evolution.
[14] S. Kyes,et al. Rifins: a second family of clonally variant proteins expressed on the surface of red cells infected with Plasmodium falciparum. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[15] Y. Ito,et al. A nonhuman primate model for human cerebral malaria: rhesus monkeys experimentally infected with Plasmodium fragile. , 1994, Experimental parasitology.
[16] C. Withers-Martinez,et al. Subtilisin‐like proteases of the malaria parasite , 2004, Molecular microbiology.
[17] G J Barton,et al. Application of multiple sequence alignment profiles to improve protein secondary structure prediction , 2000, Proteins.
[18] Q. Cheng,et al. stevor and rif are Plasmodium falciparum multicopy gene families which potentially encode variant antigens. , 1998, Molecular and biochemical parasitology.
[19] Neil Hall,et al. Analysis of the Plasmodium falciparum proteome by high-accuracy mass spectrometry , 2002, Nature.
[20] Rafael A. Irizarry,et al. Stochastic models inspired by hybridization theory for short oligonucleotide arrays , 2004, J. Comput. Biol..
[21] Leann Tilley,et al. Trafficking and assembly of the cytoadherence complex in Plasmodium falciparum‐infected human erythrocytes , 2001, The EMBO journal.
[22] Richard D. Deveaux,et al. Applied Smoothing Techniques for Data Analysis , 1999, Technometrics.
[23] Gregory A. Buck,et al. The genome of Cryptosporidium hominis , 2004, Nature.
[24] C. Sander,et al. A module of the DnaJ heat shock proteins found in malaria parasites. , 1992, Trends in biochemical sciences.
[25] Malcolm J. McConville,et al. Distinct Protein Classes Including Novel Merozoite Surface Antigens in Raft-like Membranes of Plasmodium falciparum* , 2005, Journal of Biological Chemistry.
[26] J. Ravetch,et al. Large deletions result from breakage and healing of P. falciparum chromosomes , 1988, Cell.
[27] A. E. Hirsh,et al. Protein dispensability and rate of evolution , 2001, Nature.
[28] M. Barrett,et al. Plasmodium interspersed repeats: the major multigene superfamily of malaria parasites. , 2004, Nucleic acids research.
[29] T. Wellems,et al. Transformation of Plasmodium falciparum malaria parasites by homologous integration of plasmids that confer resistance to pyrimethamine. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[30] P. Kroth,et al. Identification and characterization of a new conserved motif within the presequence of proteins targeted into complex diatom plastids. , 2004, The Plant journal : for cell and molecular biology.
[31] X. Su,et al. Identification of a subtelomeric gene family expressed during the asexual-sexual stage transition in Plasmodium falciparum. , 2005, Molecular and biochemical parasitology (Print).
[32] Yingyao Zhou,et al. In vivo transcriptome of Plasmodium falciparum reveals overexpression of transcripts that encode surface proteins. , 2005, The Journal of infectious diseases.
[33] John R Yates,et al. Proteomics approach reveals novel proteins on the surface of malaria-infected erythrocytes. , 2004, Molecular and biochemical parasitology.
[34] J A Swets,et al. Measuring the accuracy of diagnostic systems. , 1988, Science.
[35] W. Trager,et al. Human malaria parasites in continuous culture. , 1976, Science.
[36] Martin Vingron,et al. TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing , 2002, Bioinform..
[37] Travis Harrison,et al. A Host-Targeting Signal in Virulence Proteins Reveals a Secretome in Malarial Infection , 2004, Science.
[38] Christopher J. Tonkin,et al. Development of the endoplasmic reticulum, mitochondrion and apicoplast during the asexual life cycle of Plasmodium falciparum , 2005, Molecular microbiology.
[39] Yingyao Zhou,et al. The Plasmodium falciparum sexual development transcriptome: a microarray analysis using ontology-based pattern identification. , 2005, Molecular and biochemical parasitology.
[40] John R Yates,et al. A Plasmodium gene family encoding Maurer's cleft membrane proteins: structural properties and expression profiling. , 2004, Genome research.
[41] S. Brunak,et al. Improved prediction of signal peptides: SignalP 3.0. , 2004, Journal of molecular biology.
[42] Ruben Abagyan,et al. Excess Polymorphisms in Genes for Membrane Proteins in Plasmodium falciparum , 2002, Science.
[43] R. Coppel,et al. Structure of the RESA gene of Plasmodium falciparum. , 1986, Nucleic acids research.
[44] J. Beynon,et al. Differential Recognition of Highly Divergent Downy Mildew Avirulence Gene Alleles by RPP1 Resistance Genes from Two Arabidopsis Lines , 2005, The Plant Cell Online.
[45] M. Wahlgren,et al. Small, Clonally Variant Antigens Expressed on the Surface of the Plasmodium falciparum–Infected Erythrocyte Are Encoded by the rif Gene Family and Are the Target of Human Immune Responses , 1999, The Journal of experimental medicine.
[46] Elisabetta Pizzi,et al. Genome-wide identification of genes upregulated at the onset of gametocytogenesis in Plasmodium falciparum. , 2005, Molecular and biochemical parasitology.
[47] M. Wahlgren,et al. Molecular Aspects of Severe Malaria , 1996, Clinical Microbiology Reviews.
[48] W. Gilbert,et al. Exon shuffling and the origin of the mitochondrial targeting function in plant cytochrome c1 precursor. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[49] J. Dame,et al. Karyotype and synteny among the chromosomes of all four species of human malaria parasite. , 1999, Molecular and biochemical parasitology.
[50] J. Watanabe,et al. Cloning and characterization of heat shock protein DnaJ homologues from Plasmodium falciparum and comparison with ring infected erythrocyte surface antigen1Note: Nucleotide sequence data reported in this paper is available in the DDJB data bases under the accession number D85686.1 , 1997 .
[51] Alisson M. Gontijo,et al. Telomeric Heterochromatin Propagation and Histone Acetylation Control Mutually Exclusive Expression of Antigenic Variation Genes in Malaria Parasites , 2005, Cell.
[52] Thomas E. Wellems,et al. Frequent ectopic recombination of virulence factor genes in telomeric chromosome clusters of P. falciparum , 2000, Nature.
[53] T. Lithgow,et al. The J‐protein family: modulating protein assembly, disassembly and translocation , 2004, EMBO reports.
[54] T L Blundell,et al. FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties. , 2001, Journal of molecular biology.
[55] U. Tatu,et al. Host Chaperones Are Recruited in Membrane-bound Complexes byPlasmodium falciparum * , 2002, The Journal of Biological Chemistry.
[56] Nirbhay Kumar,et al. Induction and localization of Plasmodium falciparum stress proteins related to the heat shock protein 70 family. , 1991, Molecular and biochemical parasitology.
[57] Jonathan E. Allen,et al. Genome sequence of the human malaria parasite Plasmodium falciparum , 2002, Nature.
[58] Danny W. Wilson,et al. Ten families of variant genes encoded in subtelomeric regions of multiple chromosomes of Plasmodium chabaudi, a malaria species that undergoes antigenic variation in the laboratory mouse , 2003, Molecular microbiology.
[59] Sean R. Eddy,et al. Profile hidden Markov models , 1998, Bioinform..
[60] R. Coppel,et al. Mapping the Binding Domains Involved in the Interaction between the Plasmodium falciparum Knob-associated Histidine-rich Protein (KAHRP) and the Cytoadherence Ligand P. falciparumErythrocyte Membrane Protein 1 (PfEMP1)* , 1999, The Journal of Biological Chemistry.
[61] Pauline Ward,et al. Protein kinases of the human malaria parasite Plasmodium falciparum: the kinome of a divergent eukaryote , 2004, BMC Genomics.
[62] Rafael A Irizarry,et al. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. , 2003, Biostatistics.
[63] E. Koonin,et al. Essential genes are more evolutionarily conserved than are nonessential genes in bacteria. , 2002, Genome research.
[64] J. Ravetch,et al. Chromatin structure determines the sites of chromosome breakages in Plasmodium falciparum. , 1994, Nucleic Acids Research.
[65] G. Schneider,et al. Properties and prediction of mitochondrial transit peptides from Plasmodium falciparum. , 2003, Molecular and biochemical parasitology.
[66] Hedvig Tordai,et al. Insertion of spliceosomal introns in proto‐splice sites: the case of secretory signal peptides , 2004, FEBS letters.
[67] M. Vignali,et al. A protein interaction network of the malaria parasite Plasmodium falciparum , 2005, Nature.
[68] Erik L. L. Sonnhammer,et al. A Hidden Markov Model for Predicting Transmembrane Helices in Protein Sequences , 1998, ISMB.
[69] J. Carlton,et al. Gene synteny in species of Plasmodium. , 1998, Molecular and biochemical parasitology.
[70] Jonathan E. Allen,et al. Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii , 2002, Nature.
[71] S. Kyes,et al. PfEMP1 expression is reduced on the surface of knobless Plasmodium falciparum infected erythrocytes , 2005, Journal of Cell Science.
[72] Manoj T. Duraisingh,et al. Heterochromatin Silencing and Locus Repositioning Linked to Regulation of Virulence Genes in Plasmodium falciparum , 2005, Cell.
[73] G. Langsley,et al. A liver-stage-specific antigen of Plasmodium falciparum characterized by gene cloning , 1987, Nature.
[74] A. Krogh,et al. A combined transmembrane topology and signal peptide prediction method. , 2004, Journal of molecular biology.
[75] D. Mattei,et al. Pfsbp1, a Maurer's cleft Plasmodium falciparum protein, is associated with the erythrocyte skeleton. , 2000, Molecular and biochemical parasitology.
[76] Patricia De la Vega,et al. Discovery of Gene Function by Expression Profiling of the Malaria Parasite Life Cycle , 2003, Science.
[77] A. Cowman,et al. Function of the plasmodium export element can be blocked by green fluorescent protein. , 2005, Molecular and biochemical parasitology.
[78] D T Jones,et al. Protein secondary structure prediction based on position-specific scoring matrices. , 1999, Journal of molecular biology.
[79] Bart Barrell,et al. A superfamily of variant genes encoded in the subtelomeric region of Plasmodium vivax , 2001, Nature.